Auricularia subglabra: AURDEDRAFT_52353
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Entry
AURDEDRAFT_52353 CDS
T03129
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adl03016
]
AURDEDRAFT_52353
Enzymes [BR:
adl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
AURDEDRAFT_52353
Transfer RNA biogenesis [BR:
adl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AURDEDRAFT_52353
Prokaryotic type
AURDEDRAFT_52353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-ProteinID:
EJD53740
JGI:
52353
LinkDB
All DBs
AA seq
771 aa
AA seq
DB search
MEDILPPSIVLVNRDRKDAYRISERDVGITEYIAKDVPCIDGIIKQRFTDFLVYEVNQQG
EVVHIKDMTKPDAPKPEPRPAVPAPAKKEPNLAADGAWHQQFDDALSSFLSPTLIAELKK
IYEEGPEPPLVSDSGWGQRGNRASASEQSVPGEDEKEDEKPTAVVDTPAEEAPAADNKGR
GRNNRRGRGGKAKSARAPAKPSFRDDHRKVISDSIDDKTQRSELHNTIRTLFRGKLESET
LTSEDGAGANSNKIVMRWKHGQGRYDVRKKSNPGQYKPKMPPYVHFTMQKTNRDTQDAVS
HLARMLKLHVRDFGVAGTKDKRGVTVQRVSVKSQGRTLETLWKAANNVPGRRSVEEAVTM
RGERGVRVGDFAYADHGLELGMLKGNAFIITLRNVKAESEDVLNRAMESMKTKGFINYYG
MQRFGTAGVPTHSIGLALLQSDWKQAVSLILRPRPGEHPDVEAGRRAWLDDWDLDKALQL
LPRRVVAERCILENFKKQGRKGRNWMTALSTIPRNLRTMYVHAYQSYVWNAVVSERLRRY
GADRAIPGDLVYANLPNNREDGDLDADMDVEVDAARDGPGPSKNFKPKAVIILTEESAHR
YTIFDVIMPLPGRDVVYPAGDLGELYRQFLTMDGLDPDNLTRINNREYSLLGSYRKIVQL
PQELSWSVLHYTDPDVSLAQSDEDAQLGLDIPAADPDGKFVALQIRLTLTTAAYATMALR
EVTKTETSSHYQSQLTKFSEDQAFRGGRSAAAQQEEGDADGDVADADASAE
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcctgccgcccagcatcgtgctcgtgaatcgcgaccgcaaagacgcgtac
aggatctccgaacgcgacgtcggcatcacagagtacatcgccaaagacgtgccgtgcatc
gacggcatcatcaagcagaggttcacggatttcctggtctacgaggtcaaccagcaaggg
gaggtcgtccatatcaaggacatgaccaagcctgacgcgcccaaacccgaacctcgacct
gccgttcctgctccagcaaagaaggaacctaatctcgccgccgacggagcctggcatcag
caattcgacgacgcgctctcgtccttcctatcccctactctcatcgccgagctcaagaag
atctacgaggagggcccggagccaccgctggtctcagacagcggttggggtcaacgcggg
aaccgtgcgagcgcgtctgagcagtctgtacctggggaagacgagaaagaagatgagaaa
cctactgctgtggtggacactcccgcagaagaagccccagcagcagacaataaaggtcgc
gggcgaaacaacagacgaggcagaggaggtaaggccaaaagcgcacgcgcgccggcgaag
ccatccttccgtgacgaccaccgtaaggtcatctcggatagcatagatgacaagacgcag
aggtctgaactgcacaacactattcgcactctattcagggggaagctcgaaagcgaaacc
ctgacgagcgaggacggcgccggagcaaacagcaacaagatcgtcatgcgttggaagcat
ggccaaggtcgctacgacgtgcgcaagaagtccaacccaggtcagtacaaacccaaaatg
ccaccctacgtgcacttcaccatgcagaaaacgaaccgcgacacgcaggacgccgtctcg
catctcgcacgcatgcttaagctccacgtgcgcgacttcggcgtcgcgggcacgaaggac
aagcgcggtgtaaccgtgcagcgcgtgagcgtcaagtcacaggggcgcacgctcgagaca
ctctggaaggccgcgaacaacgtccctgggcgccgcagcgtcgaggaggccgtcacgatg
cgcggcgagcgcggggtacgcgtcggcgacttcgcgtatgcggaccacgggctcgagctc
ggcatgctcaagggcaacgcgttcatcatcacgctacgcaatgtcaaggctgagtcggag
gacgtgctcaatcgcgcgatggagtccatgaagaccaaaggcttcataaattactacggc
atgcaacgatttgggactgccggcgtccccacgcactccatcggtcttgccctgctgcag
tcggactggaagcaggcggtatccttgatcctccgtccccgcccgggcgagcatcccgac
gtagaggctggccgcagggcgtggctggacgactgggacctggacaaggcgctgcaactc
ttgccgcgccgcgtcgtcgccgagcgctgcattctcgagaacttcaagaagcaaggccgc
aagggcaggaattggatgaccgcgctctcgaccatcccgcgcaatctccggaccatgtac
gtccatgcatatcaatcctacgtctggaatgcggtggtgtccgagcggctgcgccgctac
ggcgccgatcgcgcaatccccggtgacttggtgtacgcgaatctgccgaataaccgcgag
gacggtgacctggacgcagatatggacgtggaggtagacgcagcgcgagatggccctggt
ccgtccaaaaacttcaagcccaaagcggtcataatcctcacagaggagagcgcccaccgc
tacaccatcttcgacgtcattatgcccctccctggcagggatgtggtataccccgcagga
gatttgggagagttgtacaggcaattcctgacgatggatgggttggatccggacaatctc
acgcggattaacaacagggagtactctctattagggtcctaccgcaagatagtacaactc
ccgcaagaactctcttggtcggtcctgcactacaccgacccggatgtctcgcttgcacag
tcagacgaagatgcgcaattgggcctcgatataccggctgccgacccggatgggaagttc
gtcgcgctgcaaatacgcctgacgctcaccaccgcggcgtacgctacgatggcgctgcgc
gaggtgaccaagacggagacgagctcgcattaccagtcgcagttgaccaagttctctgag
gatcaggccttccgaggcggccgctctgcggccgcccagcaggaggagggcgacgcagac
ggcgacgttgctgacgcggatgcttcagcagaatga
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