Auricularia subglabra: AURDEDRAFT_55120
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Entry
AURDEDRAFT_55120 CDS
T03129
Name
(GenBank) SNF2 family DNA-dependent ATPase
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
adl
Auricularia subglabra
Pathway
adl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
AURDEDRAFT_55120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_55120
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_55120
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
AURDEDRAFT_55120
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
AURDEDRAFT_55120
RSF complex
AURDEDRAFT_55120
WICH complex
AURDEDRAFT_55120
B-WICH complex
AURDEDRAFT_55120
NORC complex
AURDEDRAFT_55120
BRF complex
AURDEDRAFT_55120
NuRF complex (fruit fly)
AURDEDRAFT_55120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
AAA_14
Motif
Other DBs
NCBI-ProteinID:
EJD52770
JGI:
55120
LinkDB
All DBs
AA seq
1033 aa
AA seq
DB search
MQTSSDKLQKRRKRKDQDAELQAKRAEMDRAKAADSVKRYSHLLGQTELFQHFIDLKKER
DPEYANIIESQTAQTKGKGRKKAADKTARHRKSEKEEDDELLRDTNKEDEDDDQPFVFEE
SPTYIKGGKMRDYQVQGLNWMISLHHNGMNGILADEMGLGKTLQTVSFLGYLRHIRGITG
PHLVVVPKSTLQNWAREFERWTPDASVVVLQGTREERAEIVAKRLLPQDFDILITSYEIC
MREKGALKKFSFEYIVIDEAHRIKNMDSILSQIVRMFLSRGRMLITGTPLQNNLQELFAL
LNFICPEIFSDYKDLESFLHKGDKEEMTEEDASKVVVEALHKILRPFLLRRVKSDVEKSL
LPKKEINIYVGLSDMQRKWYRSVLEKDIDAVNGLTGKKEGKTRLMNIVMQLRKVTCHPYL
FDGAEPGPPYTTGEHLVENSGKMIILDKLLKAMKVKGSRVLIFSQMSRVLDILEDYCLYR
QYQYCRIDGGTAHEDRIASIDEYNKPGSEKFIFLLTTRAGGLGINLTSADIVVLYDSDWN
PQADLQAMDRAHRIGQTKQVYVFRFIAEGSVEERMLERAAQKLRLDQLVIQQGRTQMTKA
ANKDDLLDMIHHGAEKIVNSTDNLMVDDDIEAIIQRGEERTQELNSKYEGLNFEDLSNFK
SDSMGVQQWEGEDFRGGKHKLKGLWIEPTKRERKSNYSIDKYYQEAMRGSSTKVEKAPKA
MRLPKQIQVADFQFCSPRFVELQTKELLWAKKQAEFKVPLREAQGDLDTQEKLEAEQQAE
QDQIEAAEPFTEEDAQEMLQLEQDSFLHWNRRDFQQFIKGLEKHGRDAAAELIAQEIDGK
GASDVQEYAKVFWQRWHTLSDYDKLKQRIDEGQAKRDKDASMANMLKRKIESVRYPMQEL
HLNYPTTKGKIYSEEEDRYLLCRLHYYGLNRDDVYERIKKDISEFPVFRFDWFFKSRTSV
ELQRRCTTLLGMIAKEQDDEKPAKGKSKEKDTEEKKRTFDDAQLDDGSRASTPKGGAKKA
AAAGGSSSKKRKV
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacctcctccgacaagctgcagaagcggcgcaagcgcaaggaccaggatgcagaa
ctgcaggcgaagcgcgcagagatggatcgtgcgaaggccgccgactccgtcaaacgctac
tcccacctgctcggccagactgagcttttccagcacttcatcgacttgaagaaagaacgc
gatcctgaatatgcgaacatcattgagtcgcagaccgcgcaaaccaagggcaagggtcgc
aagaaggccgcggataaaactgcgcgtcaccgcaagagcgagaaggaagaggatgacgaa
cttctgcgcgacacgaataaagaggacgaagatgacgaccagccattcgtctttgaggag
tcacctacctatatcaagggagggaaaatgcgagactatcaggttcagggcttgaactgg
atgatctcgttgcaccacaatggcatgaacggaatccttgccgacgagatgggtttgggc
aagaccctgcaaacggtatccttccttgggtatctgcggcacattcgtggtatcaccgga
cctcacctcgtcgttgtcccgaagagtacgctgcagaactgggctcgcgagttcgagcgg
tggacgcccgacgcgagcgtcgttgttctccagggcacccgcgaagaacgtgccgagatc
gtcgcgaagcgcttactgccccaagatttcgatatcctcattacgtcgtacgaaatctgc
atgcgcgagaagggcgccctcaaaaagttctcgttcgagtacattgtcatcgacgaggcg
caccgtatcaagaacatggactcgatcctctcccagatcgtccgcatgttcctgtctcgt
gggcgcatgctcatcactggcacgcccctgcaaaacaacttgcaggagctcttcgccctg
ctcaacttcatctgccccgagatcttctccgactacaaggatcttgaaagcttccttcac
aagggcgacaaggaggagatgacagaagaagatgcgagcaaggtcgtcgtcgaggcattg
cataagatcctgcggccattcttgttgcgccgcgtgaagtccgacgtcgagaagtcgctt
cttccgaagaaggagatcaacatctacgtcggcctgtccgacatgcagcggaagtggtat
cgctctgttttggagaaggatatcgacgccgtgaacggccttaccggcaagaaggaaggc
aagacgcggttgatgaacattgtcatgcagttgcgcaaagtcacctgccatccttacctc
ttcgacggcgcagagcccggccctccgtacacgacgggcgaacacctagtcgagaattcg
ggcaagatgataatcctggacaagttgctcaaggcgatgaaagtcaagggctcccgcgtt
ctcatcttcagccagatgagccgcgttctcgatatcttggaggactattgcctctaccgc
cagtaccagtattgccgaattgacgggggcaccgctcacgaggaccgtatcgcatccatc
gacgagtacaacaagcccggtagcgagaagttcatcttcctgctgaccacccgcgctggc
ggcttgggtatcaacctcacatcagcggatattgtggttctttacgatagtgactggaac
cctcaagccgacttgcaggccatggaccgtgctcatcgtatcggccagaccaagcaggtc
tacgtattccggttcatcgcggagggtagtgtcgaggaacgcatgcttgagcgcgcagcg
cagaagttgcgcctcgatcagctcgtcattcagcaaggtcgcacgcagatgaccaaagct
gccaacaaggacgacctattggacatgatccaccacggcgctgagaagatcgtcaactcg
acggataatctcatggtcgacgacgatatcgaggccatcattcagcgcggcgaagagcgt
actcaggagctcaacagcaagtacgagggtctcaactttgaagacttgagcaacttcaag
tcggactcgatgggcgtgcagcaatgggaaggcgaagacttccgcggtggtaaacataaa
ctgaagggtctctggatcgagcccacgaagcgcgagcgcaagagcaactattccatcgac
aagtactatcaggaagccatgcgcggaagctcgacgaaggtcgagaaggctcccaaggcc
atgcgattgccaaagcagattcaggttgccgatttccaattttgctcgcctcggttcgtc
gaactgcaaacgaaagaattgctctgggccaagaagcaggcggaattcaaggtccccttg
cgcgaggcgcagggcgacctcgacacgcaagagaagttggaggccgagcaacaagccgag
caggaccagatcgaagctgccgagccattcacggaggaggacgcccaggagatgttgcag
ctggagcaggactccttcctacactggaatcggcgagacttccagcagttcatcaaggga
ctggagaagcatgggcgcgacgccgcggcggaacttattgcgcaagaaatcgacggcaag
ggcgcctcggacgtgcaggagtacgctaaggtgttctggcagcggtggcacaccctgagt
gactacgacaagctcaagcaacgcatcgatgaaggccaggctaagcgcgacaaggacgcg
tccatggccaacatgctgaagcggaagattgaatccgtccgctatccgatgcaagagctc
cacttgaactatcctacgacgaagggcaagatctacagcgaagaggaagatcgctacctc
ctctgccgcctgcattactacggcctgaatcgggacgatgtctacgagcgtatcaagaag
gatatcagcgagttccctgtcttccgctttgactggttcttcaagagccgcacctctgtc
gagttgcaacggcgatgcaccacgctgctcggcatgatcgccaaggagcaggacgacgag
aagccggcgaagggcaagagcaaagagaaggacacggaggagaagaaacggaccttcgac
gacgcccagctcgacgacggctcccgtgcgtctacgccgaagggcggtgccaagaaagca
gcagccgcgggcggatcctcgtcgaagaagagaaaagtatag
DBGET
integrated database retrieval system
