KEGG   Auricularia subglabra: AURDEDRAFT_55835
Entry
AURDEDRAFT_55835  CDS       T03129                                 
Name
(GenBank) RNA polymerase Rpb6
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
adl  Auricularia subglabra
Pathway
adl03020  RNA polymerase
adl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    AURDEDRAFT_55835
  09124 Replication and repair
   03420 Nucleotide excision repair
    AURDEDRAFT_55835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:adl03021]
    AURDEDRAFT_55835
   03400 DNA repair and recombination proteins [BR:adl03400]
    AURDEDRAFT_55835
Transcription machinery [BR:adl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     AURDEDRAFT_55835
  RNA polymerase III system
   RNA polymerase III
     AURDEDRAFT_55835
  RNA polymerase I system
   RNA polymerase I
     AURDEDRAFT_55835
DNA repair and recombination proteins [BR:adl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      AURDEDRAFT_55835
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: EJD51973
JGI: 55835
LinkDB
AA seq 110 aa
MNGTETNGTAAQGANGTAGTEAKQQPAERQPNKVKITTPYLTKYERARVLGTRALQISMN
APVLVPLEGETDALQIAIKELSQKKIPLIIRRYLPDGSFEDWSIKDLITE
NT seq 333 nt   +upstreamnt  +downstreamnt
atgaacggcactgagacgaacggcaccgcggcgcagggcgcaaatggcacggctggcacg
gaggcgaagcagcaaccggccgagcgacaacccaacaaggtcaagatcacaacgccctat
ctgaccaagtacgagcgcgcacgagtgctcgggacgcgtgcgttgcaaatcagcatgaac
gctcctgtcctcgtaccacttgaaggcgaaactgacgcgctccaaatcgcgatcaaggag
ctctcgcaaaagaaaatccctctgatcattcgacgttacctcccagacggtagcttcgag
gattggagtatcaaggacctcatcaccgagtga

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