Auricularia subglabra: AURDEDRAFT_66043
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Entry
AURDEDRAFT_66043 CDS
T03129
Name
(GenBank) WD40 repeat-like protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_66043
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
AURDEDRAFT_66043
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
EIF3I
Beta-prop_VPS8
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_SPT8
WDR54
DUF2508
Motif
Other DBs
NCBI-ProteinID:
EJD43766
JGI:
66043
LinkDB
All DBs
AA seq
475 aa
AA seq
DB search
MHPQAILAASAPTLALVDYATGTTLASWKPSAAAERCTAAVATRNGLGGLVLSVQPDKPL
LHAFAFQKDQMLHKMVLPEKLSALALDSSASYCAGGTQTGRIYLWEASSVASGLLLNTFD
AHYRQVTVLRFSPDGAALFTGSEDSGIAVWSLSRLLDNTTQNDPPAPYATFADHTLAISD
LICGVGAFPAYRLFSSSLDGSVKMWDVSSRELLGTFAFPTPVAHLAVDPAERAIYVAAAA
DRGVVYQIDLYSRGKGTTARAAVGAGDTLHMGAEQDGERSRVFSVGKPVTSLALDMPGTQ
LLAGAQDGSISLFDVASHQLLRTIAPPAHGSPGPVTFLHTLLRPADLVGPAASGSAKDAP
PLRPLAVFHRIRDRAAREAHEVPLVLPRSPPIAPAYTQDAIWREHAAFVSQQAQQSQQED
TGALVAEIARLKEQLVQAKSINDAMWEAAVNAALVPAAGSAVQRRLAKKQKVEQV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgcaggccattctcgcagcctcggcgcccaccctcgccctcgtagactacgcc
acgggcaccaccctggcctcatggaagccctccgccgccgccgagcgctgcacggccgcg
gtggcgacccgcaacggcctcggaggcctggttctttccgtacagccagacaagccgctg
ctgcatgcatttgccttccaaaaagaccagatgctacacaagatggttctcccggaaaag
ctgtctgcactggctctggactcgtccgcctcctactgcgccggcggcacacagaccggc
cgcatatacctctgggaggcgagctccgtggcttccgggctcctgctcaacacattcgac
gcgcattaccgacaagtcaccgtactccgcttcagtcccgacggcgcagccttgttcaca
ggttctgaggactcgggaatagctgtctggtccctctcaagactgctcgacaacaccacg
cagaacgatccgcccgcaccatacgccacctttgcagaccatacgcttgccatttcagac
ctgatatgcggcgtcggtgcctttcccgcgtaccggctcttttcgtcctcgctcgacggc
tccgtgaagatgtgggacgtctcctcccgcgaactcctgggcaccttcgcgtttccgacg
cccgtcgcccatctggccgtcgatcccgcggagcgcgcgatatacgtcgccgcggccgcc
gaccgcggcgtggtgtaccagatcgacctgtattcgcgcgggaagggaaccacggcgcgc
gcggcagttggcgcgggcgatacgctgcatatgggcgcggagcaggacggcgagcgctcc
cgcgtgttttccgttgggaagcccgtgacgagcctcgcgctcgacatgcctgggacgcag
ctcctcgccggcgcgcaggacggcagcatcagcctcttcgacgtcgcgtcgcaccagctg
ctccgcacgattgcgccgcccgcgcacggcagccccgggcccgtgacgttcctgcacacg
ctcctgcggcccgcggacctcgtcggccccgcggcgtccggcagcgccaaggacgcgccg
ccgctgcgcccgctcgccgtgttccaccgcatccgcgaccgtgcggcgcgtgaggcgcac
gaagtgccgctcgtgctcccccgctcgcctccgattgcaccggcctacacgcaggacgca
atatggcgcgaacacgcagcctttgtgtcgcagcaggcgcagcagagtcagcaggaggat
acgggcgcgctcgtggctgaaatcgcgaggctgaaggagcagctggtacaggccaagagc
atcaatgatgcaatgtgggaggccgccgtcaacgctgcactcgtgcccgctgctggctct
gcggttcaacgacgcttggccaagaagcagaaggttgaacaagtgtga
DBGET
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