KEGG   Auricularia subglabra: AURDEDRAFT_78368
Entry
AURDEDRAFT_78368  CDS       T03129                                 
Name
(GenBank) Sm-like ribonucleo protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
adl  Auricularia subglabra
Pathway
adl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURDEDRAFT_78368
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:adl03041]
    AURDEDRAFT_78368
   03032 DNA replication proteins [BR:adl03032]
    AURDEDRAFT_78368
Spliceosome [BR:adl03041]
 Complex A
  U1 snRNP components
   Sm proteins
    AURDEDRAFT_78368
  U2 snRNP components
    AURDEDRAFT_78368
 Complex B
  U1 snRNP components
    AURDEDRAFT_78368
  U4/U6.U5 tri-snRNP components
    AURDEDRAFT_78368
 Complex C
  U2 snRNP components
    AURDEDRAFT_78368
DNA replication proteins [BR:adl03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     AURDEDRAFT_78368
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-ProteinID: EJD55327
JGI: 78368
LinkDB
AA seq 111 aa
MSQFAHLPRSELDEAQLRQLEEHEISQGPLSVLQQAVRNHTQVLISLRNNKKLLARVKAF
DRHTNMVLENVKEMWTEVPKGKNKKPVNKDRFISKMFLRGDSVVLVLRNTA
NT seq 336 nt   +upstreamnt  +downstreamnt
atgagccagttcgcgcatctccccaggtcggagctcgacgaggcgcagctgcgccagttg
gaggagcacgagatctcgcagggaccgctctccgtgctgcagcaggcggtgcgcaaccac
acccaggtcctgatctcccttcgcaacaacaagaagctgctggcgcgcgtcaaggccttt
gataggcatacgaacatggttcttgaaaatgtgaaagagatgtggacagaagtgccgaag
ggtaagaataagaaacccgtcaacaaggaccgtttcatcagcaagatgttcttgcgtggc
gactccgtcgtgctagttttgaggaacactgcatga

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