Auricularia subglabra: AURDEDRAFT_80234
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Entry
AURDEDRAFT_80234 CDS
T03129
Name
(GenBank) insert subdomain of RNA polymerase alpha subunit
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
adl
Auricularia subglabra
Pathway
adl03020
RNA polymerase
adl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AURDEDRAFT_80234
09124 Replication and repair
03420 Nucleotide excision repair
AURDEDRAFT_80234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adl03021
]
AURDEDRAFT_80234
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_80234
Transcription machinery [BR:
adl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AURDEDRAFT_80234
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AURDEDRAFT_80234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
EJD53687
JGI:
80234
LinkDB
All DBs
AA seq
380 aa
AA seq
DB search
MDGAPNVKIEDLRRDRVKFTLENVDLAFANSLRRVMMADLPTVAIDMVEIESNTGVLVDE
LLAHRLGMIPLVSTNCDEAMRYTRDCNCLSSCSSCAVQLELKVSCNTDNRTLDVTSNHLE
VVPMDSYDNFDMGGPATGEELSRRVENFGHPVGKHDPSVAPVLIAKLRKGQELKLRCIAK
KGVAKEHAKWSPCAAVSFEYDPHNKLRHTSYWFEDDIKAEWPPTANSMHEEPPPDDAPFD
YTAKPTKFYMEAETVGSLAPKEVVMKGLMELQSRLAKLMLDLKGADRPPEDLEHIDVPIP
SIQPLPPMPPLALPNGLNGSAPPNPVAPRAAPSSGWSPVGAGGNSGWGSTNGGGSGWGDD
AGAGASGTSGWASPQAGWRM
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgctcccaacgtgaaaatagaagatctcagacgcgaccgcgtcaagtttacg
ctggaaaatgttgaccttgcctttgctaattcgctgcgacgagtgatgatggcagacctg
cccactgtcgctatcgatatggtagaaatcgagagcaatacgggcgtgctcgtcgacgag
ttgctcgcacaccgactcggcatgattccgcttgtcagcacgaactgcgacgaagctatg
cggtatacacgagactgcaactgcctctcatcctgctcgtcatgtgccgtccagctcgag
ctcaaggtctcgtgcaacaccgacaacaggacattggacgtcacgagcaaccacctcgaa
gttgtacctatggacagttatgacaatttcgatatgggcgggcctgccaccggtgaggag
ctttcgagacgcgtcgagaactttgggcacccggtgggcaaacacgaccccagcgttgcg
ccggtcctgattgcgaagctgcgcaaagggcaggagctgaagctgcgctgcatcgcgaag
aagggcgtggcgaaggagcacgcaaagtggtcgccgtgcgcggccgtctcgttcgaatac
gacccgcacaacaagctgcggcacacgagctactggttcgaggacgacatcaaggccgag
tggccgccgacggccaactcgatgcacgaggagccgccgccggacgacgccccgttcgac
tacaccgcgaagccgaccaagttctacatggaggccgagaccgtcggcagcctcgcgccc
aaggaggtcgtcatgaaggggctcatggagcttcagagccgcctcgcgaagctcatgctc
gacctcaaaggcgcggacaggccgcccgaggacttggagcacatagatgtgcccattccc
tccatacagcccctaccgcccatgccgcccctggcgctcccgaacggtctgaacggcagc
gcgccgccgaatcctgtggcgccgcgcgccgctccctcctcgggctggagccccgtgggc
gcgggcggcaactctggctggggctcaacgaacggcggcggttccggctggggagacgat
gcgggcgccggcgcctcggggacgtctggttgggcgtcgccgcaggcgggctggcgtatg
tga
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