Auricularia subglabra: AURDEDRAFT_81203
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Entry
AURDEDRAFT_81203 CDS
T03129
Name
(GenBank) ribosomal protein S5 domain 2-like protein
KO
K12587
exosome complex component MTR3
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_81203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_81203
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AURDEDRAFT_81203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
EJD53014
JGI:
81203
LinkDB
All DBs
AA seq
255 aa
AA seq
DB search
MQSGIDRRRITGPDESFAPVYEDAQQDEPMGRAGRAPRDIRPIYLQTGLITQANGSAYIE
TERAKIACAVYGPRQPKNAAYSDKGKLNVEVKFAPFACRTRRVPNKDAEDRSIANLVQQA
LLPAVRLELLPKSSLDIFVTILEADGLAGAVAAASTAASAALAHAGIEMFGLVTACAASV
VGDEVWLDPDEDEQARGRGTLVLACMPALGSVTSVWQTGRLRVPEALQCMNECQERCTDV
HFVVAKALLDARPAT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgggatcgaccgccgccgcatcacaggccccgacgagagctttgcgccagtg
tacgaggatgcgcaacaggacgagcccatggggcgtgcaggccgcgcgccacgcgatata
cggcctatctacctgcaaacggggctcatcacgcaggcgaacggctctgcgtacatcgag
actgaacgcgccaagatagcgtgtgccgtatacggcccgcggcagccgaagaacgcggcg
tacagcgacaagggcaaacttaatgtcgaagtcaagttcgcgccgttcgcgtgccgcacg
cggcgagtacccaacaaggacgcagaagaccgctcgatagccaatctggtgcaacaagcg
ttgttaccagccgtgcggctcgagctgctcccaaaatcctcgctcgacatcttcgtcaca
atcctagaggcggatggcctcgcgggtgcggtcgcagccgcaagtacagccgccagtgcc
gcgttggcacatgcgggcattgagatgttcggcctcgtcacggcgtgtgccgcgtccgtt
gtgggagacgaggtgtggctcgatcccgacgaggatgagcaagcgaggggtcgcggaacg
ctcgtcctcgcgtgcatgcctgcgctcgggtcggttacgagcgtgtggcaaacaggacgg
ctgcgtgtcccggaggctttgcagtgcatgaatgagtgccaggaacgatgcacggatgta
catttcgtagtcgccaaagcgctcctcgatgctcggcctgcaacatga
DBGET
integrated database retrieval system
