Auricularia subglabra: AURDEDRAFT_86811
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Entry
AURDEDRAFT_86811 CDS
T03129
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10756
replication factor C subunit 3/5
Organism
adl
Auricularia subglabra
Pathway
adl03030
DNA replication
adl03410
Base excision repair
adl03420
Nucleotide excision repair
adl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AURDEDRAFT_86811
03410 Base excision repair
AURDEDRAFT_86811
03420 Nucleotide excision repair
AURDEDRAFT_86811
03430 Mismatch repair
AURDEDRAFT_86811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adl03032
]
AURDEDRAFT_86811
03036 Chromosome and associated proteins [BR:
adl03036
]
AURDEDRAFT_86811
03400 DNA repair and recombination proteins [BR:
adl03400
]
AURDEDRAFT_86811
DNA replication proteins [BR:
adl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
AURDEDRAFT_86811
DNA Replication Termination Factors
ELG1-RFC complex
AURDEDRAFT_86811
Chromosome and associated proteins [BR:
adl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
AURDEDRAFT_86811
DNA repair and recombination proteins [BR:
adl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
AURDEDRAFT_86811
Check point factors
HRAD17(Rad24)-RFC complex
AURDEDRAFT_86811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
AAA_assoc_2
AAA_16
DNAX_ATPase_lid
Sigma54_activ_2
DUF3802
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
EJD47250
JGI:
86811
LinkDB
All DBs
AA seq
357 aa
AA seq
DB search
MSLWVDKYRPRSLDELHYHADLSARLKSLAASGDFPHMLFYGPSGAGKKTRILATLRAIF
GPGVEKVKIDQRVFVTPSKRKLDVNVVQSNFHIELTPSDVGNYDRVVIQEILKEIAATQQ
IDLNAKQRFKIVVINEADSLSRDAQAALRRTMEKYMSNMRLVLCTNSTSNLIAPIKSRCL
LVRVAAPNAEEMQAVLEHVAKKEKFDLPPTASEQIVADANGNLRKALLVLEALKMQSPDL
TGDLAIAKPDWEAYCHAVADLIVQRQTPEQVMLVRAKMYELLSHCIPPTVVIKTVAERVV
ERVDEALRADVMHWAAVYEMRMRVGSKKIFHLEAWVVKVMSLYKHFMLDIDLTGGFD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctgggttgacaaataccggccgcggtcgctggacgagctccattatcacgcc
gacctatctgcaagattaaagtcgctggccgcgagcggcgacttcccgcacatgctgttc
tacgggccgtccggcgccgggaaaaagacgcggatcctggcgacgctgcgcgccatcttc
ggcccgggcgtggagaaggtcaagatcgaccagcgcgtgttcgtgacgccgtcgaagcgc
aagctggacgtcaacgtcgtccagtccaacttccacatcgagctcaccccgagcgacgtc
ggcaactacgaccgcgtcgtcatccaggagatcctcaaggagatcgctgccacccagcag
atcgacctcaacgccaagcagcgcttcaagatcgtcgtcatcaacgaggccgactcgctc
tcgcgcgacgcacaggccgccctcaggcgcaccatggagaagtacatgagcaacatgcgc
ctcgtgctctgcaccaacagcacctccaacctcattgcgcccatcaagagccgctgcctg
ctcgtccgcgttgcagctccgaatgctgaagagatgcaggccgtcctcgagcacgtcgcc
aagaaggaaaagttcgacctgccgcccaccgcgtccgagcagattgtggcggacgcgaac
ggcaacttgagaaaagcgctcctggtgctcgaggcgctcaagatgcaatcgccggacctg
acgggcgacctggcgatcgcgaagccggactgggaggcgtactgccacgccgtcgcggac
ctgatcgtccagcggcagacgcccgagcaggtcatgctcgtgcgcgcgaagatgtacgag
ctgctgagccactgcatcccgcccaccgtcgtcatcaagacggtggccgagcgcgtggtg
gagcgcgtggacgaggcgctcagggcggacgtgatgcactgggcggccgtctatgaaatg
cgcatgcgcgtcgggtcaaaaaagatattccacctcgaggcatgggtcgtgaaggtgatg
agcttatacaagcacttcatgcttgacatcgacctgacaggcggctttgactga
DBGET
integrated database retrieval system
