KEGG   Auricularia subglabra: AURDEDRAFT_91236
Entry
AURDEDRAFT_91236  CDS       T03129                                 
Name
(GenBank) LSM-domain-containing protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
adl  Auricularia subglabra
Pathway
adl03018  RNA degradation
adl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:adl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AURDEDRAFT_91236
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AURDEDRAFT_91236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adl03019]
    AURDEDRAFT_91236
   03041 Spliceosome [BR:adl03041]
    AURDEDRAFT_91236
Messenger RNA biogenesis [BR:adl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     AURDEDRAFT_91236
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     AURDEDRAFT_91236
Spliceosome [BR:adl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    AURDEDRAFT_91236
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-ProteinID: EJD40208
JGI: 91236
UniProt: J0DCR0
LinkDB
AA seq 95 aa
MSSLQGYVDHRVYLVLTDGRSIIGTLRGYDQKSNIVLSESVERIYSADSGVDEAQLGLYL
VKGDTIALIGELDEAMDKAVPLDSIRADPIQPVHW
NT seq 288 nt   +upstreamnt  +downstreamnt
atgtccagcctccagggctatgtcgaccaccgcgtttacctcgtgctcacagacggccgc
tccatcataggcactttgcgcggctacgaccagaagagcaacattgtgctcagcgagagc
gtcgagcgaatatacagcgcggactcgggcgtcgatgaagcccagttaggcctgtacctc
gtcaagggtgataccatagcactcatcggcgagctggacgaggccatggacaaagccgtg
cctctcgacagcatacgcgcagacccgatccagcccgtacattggtga

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