Auricularia subglabra: AURDEDRAFT_91236
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Entry
AURDEDRAFT_91236 CDS
T03129
Name
(GenBank) LSM-domain-containing protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
adl
Auricularia subglabra
Pathway
adl03018
RNA degradation
adl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AURDEDRAFT_91236
09123 Folding, sorting and degradation
03018 RNA degradation
AURDEDRAFT_91236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adl03019
]
AURDEDRAFT_91236
03041 Spliceosome [BR:
adl03041
]
AURDEDRAFT_91236
Messenger RNA biogenesis [BR:
adl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AURDEDRAFT_91236
mRNA degradation factors
5'-3' decay
Lsm complex
AURDEDRAFT_91236
Spliceosome [BR:
adl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AURDEDRAFT_91236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-ProteinID:
EJD40208
JGI:
91236
UniProt:
J0DCR0
LinkDB
All DBs
AA seq
95 aa
AA seq
DB search
MSSLQGYVDHRVYLVLTDGRSIIGTLRGYDQKSNIVLSESVERIYSADSGVDEAQLGLYL
VKGDTIALIGELDEAMDKAVPLDSIRADPIQPVHW
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcctccagggctatgtcgaccaccgcgtttacctcgtgctcacagacggccgc
tccatcataggcactttgcgcggctacgaccagaagagcaacattgtgctcagcgagagc
gtcgagcgaatatacagcgcggactcgggcgtcgatgaagcccagttaggcctgtacctc
gtcaagggtgataccatagcactcatcggcgagctggacgaggccatggacaaagccgtg
cctctcgacagcatacgcgcagacccgatccagcccgtacattggtga
DBGET
integrated database retrieval system