Auricularia subglabra: AURDEDRAFT_97489
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Entry
AURDEDRAFT_97489 CDS
T03129
Name
(GenBank) DEAD-domain-containing protein
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
adl
Auricularia subglabra
Brite
KEGG Orthology (KO) [BR:
adl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adl03009
]
AURDEDRAFT_97489
Enzymes [BR:
adl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AURDEDRAFT_97489
Ribosome biogenesis [BR:
adl03009
]
Eukaryotic type
Pre-60S particles
Helicases
AURDEDRAFT_97489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SWI2_SNF2
SecA_DEAD
CMS1
Motif
Other DBs
NCBI-ProteinID:
EJD53343
JGI:
97489
LinkDB
All DBs
AA seq
522 aa
AA seq
DB search
MQDAAPAPPAALPSFPLPTQPAPPSAETLSRQGLDSALLGAMRVDPHTTLDLDALPAGTL
SERTKKRLKDLGIRELFAIQTALVPHLLAKPTRALYLPYSPPRDVCASAPTGSGKTLAYV
LPLAELLAMRAVPRLRALIVLPTRDLVAQVREVFEAVAKGAGLRVGSVTGAASFAHEKAQ
LVDKRGESKVDVLVCTPGRLIDHLDGTEGFTLQHLRFLVIDEADRLLTQSFQDWLARVLS
AITPPSTPSSTLPSRPVAPSFLPHPFASAGSNLRPDFEPPPRPSCQKMLLSATLTRDPGR
LAALGLHHPQYFVVSSSGGAAAPEEFGAVPEGLDERFCVIDPAEKPLVLAWILREHVLLA
AGGEEKKQVLVFCKSVEAATRLGVLLAAMLADVGKSVASYSSDAPRSLLERFRTGAVDVL
VCSDLVSRGLDVPSVAAVLNYDAPVDARKYVHRVGRTARAGRRGDAWTMVEGQEARHFKE
LLAAAGRTDRVKKVRVAEKVLEPLRPAYEDALKKLAEAYGRA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgctgcgcctgcgcccccagcagctctgccgtcgttcccgctgcccacacag
cccgcgccgccctcagcagaaactctcagccgccagggactggactctgccctgttaggc
gccatgcgtgtagacccgcatacgacgctcgacctcgacgctcttcctgcaggcacgctc
tccgagcgcacgaagaaacggttaaaagacctcggcatccgcgagctcttcgcaatccaa
acagcccttgtcccgcacctcctcgcaaagccgacacgtgcattgtacctcccctactca
cctccgcgcgacgtctgcgcgtccgcgcctacaggctcaggcaaaactctcgcgtacgtg
ctgccgctcgcggagttgctggcgatgcgtgcggtgccgcgtctgcgcgctttgatcgtg
ctgcctacgcgtgaccttgtcgcgcaggtgcgcgaggtcttcgaggccgtcgcgaagggc
gccggcctgcgcgtcgggagcgtcaccggcgccgcgagctttgcgcacgagaaggcgcag
ctcgtggataagcgcggagaaagcaaggtcgacgtgctcgtgtgcacgcctggccggttg
atcgaccatttggatggcacggaggggtttacgttgcagcatttgcggttcctcgtcata
gatgaagccgaccgcctgctcacacaatcgttccaagactggttggcgcgcgtcctaagc
gcgatcacgcctccctccaccccgtcatccacactcccgtcacgtccagtagcgccctcc
ttccttccgcaccccttcgcttctgcaggaagcaacctccgaccagacttcgagcccccg
ccccgtccctcctgccaaaaaatgctcctctccgcaacactcacacgcgacccagggcgt
ctcgccgccctcggactccaccacccgcaatatttcgtcgtctcttcctccggcggcgct
gcagcgccagaagaatttggcgccgttccggagggactggacgagcgcttctgcgtcatc
gacccagcggagaagccgctcgtcctcgcgtggatcctccgcgagcacgtcctgctggcg
gctggcggcgaggagaagaagcaggtgctcgtgttctgcaagagcgtcgaggctgcgacg
aggttgggcgtgctgctcgctgcgatgctcgcggatgtgggtaagagcgtcgcatcgtac
tcgagcgacgcgccgcgcagcttgctggagcggttccgcactggcgctgtggatgtgctg
gtgtgcagcgacctcgtgtcgcgtgggctggacgtgccgagcgtcgcggccgtgctcaac
tacgacgcgcccgtcgacgcgcggaaatacgtccaccgtgtcgggcgcaccgcgcgtgcc
ggccggcgcggcgacgcgtggacgatggtcgagggtcaagaggcgaggcacttcaaggag
cttcttgcagccgctgggaggacggacagagtcaagaaggtccgtgtcgcggagaaggtg
ctggagccattgcggccggcgtatgaggacgcgttgaagaagttggcggaggcatatggg
cgtgcatag
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