Alicycliphilus denitrificans BC: Alide_0129
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Entry
Alide_0129 CDS
T01397
Name
(GenBank) sigma-54 factor interaction domain-containing protein
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adn03000
]
Alide_0129
Transcription factors [BR:
adn03000
]
Prokaryotic type
Helix-turn-helix
Other families
Alide_0129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
GAF
Mg_chelatase
AAA
HTH_8
AAA_2
AAA_22
HTH_50
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADU97915
LinkDB
All DBs
Position
142653..144266
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AA seq
537 aa
AA seq
DB search
MTVKEAELATVLVDLCADLGTELPQAVRLQRLVDVLRAQFGCGAVALLRLEEERLRPMAV
AGLVSDTLGRRFVVGQHPRLAAILARHEVTCFEHDSTLPDPYDGLLDTLVGEPLPVHDCM
GVGLHVEGRPWGVLTLDALATGTFGAAARRRLAQSVPLVEAVVRVARLEQELRTLRMAAS
GPGEGGAALASSERGGVGELEIVGESPALKRLLHELGIVAASELPVLLLGETGVGKELFA
RLLHHQSPRHDRPLVHVNCAALPESLAESELFGHVRGAFSGAVSDRPGRFEAAEGGTLFL
DEVGELPLSVQAKLLRTLQNGEIQRLGADRPRSVNVRVIAATNRNLREQVASGAFRADLY
HRLSVYPVPIPPLRERGNDVLLLAGRFLDFNRARLGLRSLRLSPDAQAALRRYRWPGNVR
ELEHVISRAALKALSRGADRNSIVTLEEGLLDLDALDVPAADGPAAPAAPGPAAGAAAGA
ALAAPAGTLRDTVDACQRQAIIAALDRHQGNWAQAARALDVDSSNLHKLARRLGLKS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgaaagaggccgagctcgcgaccgtcctggtggacttgtgcgccgacctgggc
accgagctgccccaggccgtgcggttgcagcgcctggtggacgtgctgcgcgcccagttc
ggctgcggtgccgtggcgctgctgcgcctggaggaagagcgcttgcgcccgatggccgtc
gcgggcctggtcagcgacaccctggggcggcgcttcgtcgtggggcagcacccgcgcctg
gccgcgatcctggcgcgccacgaggtgacctgcttcgagcacgacagcaccctgcccgac
ccgtacgacggcctgctcgacaccctggtcggcgagccgctgcccgtgcacgactgcatg
ggcgtgggcctgcacgtggagggccggccctggggcgtgctcacgctcgacgcgctggcc
accggcaccttcggcgccgcggcgcgccggcgcctggcgcagagcgtgccgctggtcgag
gcggtggtgcgcgtggcgcgactggagcaggagctgcgcacgctgcgcatggcggcctcc
gggcccggggagggcggcgcggcgctggcatcgtccgagcgcggcggtgtgggcgagctg
gagatcgtcggcgagagccccgcgctcaagcgcctgctgcacgagctgggcatcgtcgcc
gcctccgagctgcccgtgctgctgctgggcgagaccggcgtgggcaaggaactgttcgcg
cgcctgctgcaccaccagtcgccgcggcacgaccggccgctggtgcacgtgaactgcgcg
gccctgcccgaatcgctggccgagagcgaactcttcggccacgtgcgcggcgccttttcg
ggcgcggtgagcgaccggcccggccgcttcgaggccgccgagggcggcaccctgttcctc
gacgaggtgggcgagctgcccctgtcggtgcaggccaagctgctgcgcacgctgcagaac
ggcgagatccagcgcctgggcgccgaccgcccgcgcagcgtgaacgtgcgcgtgatcgcc
gccaccaaccgcaacctgcgcgagcaggtggccagcggcgccttccgcgccgacctgtac
caccgcctgtcggtctatcccgtgcccataccgccgctgcgcgaacgcggcaacgacgtg
ctgctgctggccgggcgcttcctggacttcaaccgcgcccgcctggggctgcgcagcctg
cgcctgtcgcccgacgcgcaggccgcgctgcgccgctaccgctggcccggcaacgtgcgc
gagctcgaacacgtgatcagccgcgccgccctgaaggccctgagccgcggcgcggaccgc
aactccatcgtcacgctggaggaaggcttgctggacctcgacgcgctggacgtgcccgcc
gcagacggccccgccgcgcccgccgcccccggccccgcagcgggcgccgcagcgggcgcc
gcgctggcagcgcccgcgggcaccctgcgcgacaccgtcgatgcctgccagcgccaggcc
atcatcgcggccctggaccgccaccagggcaactgggcccaggccgcgcgcgcgctggac
gtggattcgagcaacctgcacaagctggcgcggcggctggggctcaaaagctga
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