KEGG   Alicycliphilus denitrificans BC: Alide_0217
Entry
Alide_0217        CDS       T01397                                 
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
adn  Alicycliphilus denitrificans BC
Pathway
adn02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:adn00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Alide_0217
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:adn02044]
    Alide_0217
Enzymes [BR:adn01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Alide_0217
Secretion system [BR:adn02044]
 Type IV secretion system
  Trb secretion system protein
   Alide_0217
SSDB
Motif
Pfam: T2SSE TrwB_AAD_bind nSTAND3 AAA_16 FtsK_SpoIIIE AAA_28 Zeta_toxin ABC_tran AAA_25 CbiA IstB_IS21 ResIII DEAD AAA_7 MMR_HSR1 ATPase AAA_19 GTP_EFTU AAA_29 MobB TIP49 AAA_30 AAA_22 Sigma54_activat TsaE
Other DBs
NCBI-ProteinID: ADU98000
LinkDB
Position
complement(241814..242848)
AA seq 344 aa
MSAVPSFTAVSLDRRIQMLRTAMGPLIAAALEDPDVVEVMLNPDRTLWIDRLSSGRAPMG
VELSEADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRA
FGVIPLSRYIEDGMMTAAQAGLLVRAVRERQNILIAGGTSTGKTTLANALLAEIAATGDR
VLVLEDTVELQCAARDHVPLRTRQGVVSMTELVRSSMRLRPDRVVVGEVRGAEALDLIKV
WGTGHPGGIATIHAGSALGALLRLEQLILEVAVNPPRALIAEAVNVVIHIAGRGRKRRIE
SIARVIGFDGVGYHLADALEAPFPELLPQSDLSSPSPDHSGELP
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgagcgccgttccttccttcaccgccgtttccctggatcgccgcatccagatgctgcgc
acggcaatggggccgctgatcgccgccgcgctggaagaccccgacgtagtggaagtcatg
ctgaacccggatcgaaccttgtggatcgaccggctttcgtcgggtcgcgcaccgatgggt
gtggagctgtccgaggcggacggtgaacgcatcatccgcctcgtcgcggcccacgtcggc
gccgaggtgcatcgcggtcagccgctcctgacggcggagctgcccgagacgggcgagcgc
ttcgagggcatcttgccgcccgccgcaccggggccggccttcgccttgcgcaagcgcgcc
tttggcgtgatcccgctgtcgcgctacatcgaggacggaatgatgaccgccgcgcaggcg
ggtctgctggtgcgcgccgtgcgcgagcgccaaaacatcctgatcgcaggtgggacgagc
accggcaagaccaccttggccaatgcgctactggcggagatcgccgccacgggcgaccgc
gtgctggtgctcgaagacactgtggagctgcaatgcgcggcccgcgaccatgtgccgctg
cgcacacgccagggcgtcgtgtccatgaccgagttggtgcgttcgtccatgcgcctgcgc
ccggatcgcgtggtcgtcggcgaggtacgcggcgccgaagcgctggatctcatcaaggtg
tggggtacaggccatccgggcggcattgccacgatccatgccggctccgcgctgggcgcg
ctgctgcgtttggagcaactgatcctcgaagtggcggtgaacccgccccgtgcgttgatc
gcggaagcggtcaatgtggtcatccacatcgctgggcgcgggcgcaagcgccgcatcgag
agcatcgcccgcgtcatcggcttcgatggcgtgggctaccacctggcggatgcgcttgag
gctccattcccggagctgctgccgcagtccgacctttcctccccgtcccccgaccactct
ggagaacttccatga

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