Alicycliphilus denitrificans BC: Alide_0293
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Entry
Alide_0293 CDS
T01397
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adn03400
]
Alide_0293
DNA repair and recombination proteins [BR:
adn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Alide_0293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_22
DnaB_C
ChlI
AAA_16
GvpD_P-loop
RecA
Lon_C
AAA_30
NTPase_1
DUF7125
nSTAND3
AAA_5
AAA_29
SLFN-g3_helicase
NACHT
ATPgrasp_N
AAA_24
NPHP3_N
DUF7129
AAA_19
AAA
AAA_14
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ADU98074
LinkDB
All DBs
Position
326367..327749
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AA seq
460 aa
AA seq
DB search
MAKDKTLYSCSECGASSPRWLGKCPGCGAWNTLIETVPDAGPGKNRLSGAGQYAGLAQAQ
SVMPLAAIEATEVARTPSGIEELDRVLGGGVVEGGVVLIGGDPGIGKSTLLLQAMDALQR
VGLPTLYVTGEESGAQVALRSRRLGLEASQVNVLAEIQLEKILATIEATQPAVAVIDSIQ
TIYSDQLTSAPGSVAQVRECAAHLTRLAKATGIAVVLVGHVTKEGALAGPRVLEHMVDTV
LYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVANPSAIFLSQHSEPVPGSCV
LVTLEGTRPLLVEIQALVDGGGPSPRRLSVGLERDRLAMLLAVLHRHAGVACADQDVFVN
AVGGVRISEPAADLAVMLSITSSLRGRALPKGFIAFGEVGLAGEVRPAPRGQERLKEAAK
LGFTVAVVPKANAPKKPIPGLEIHAVERVDEAMAAVRGLG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggacaaaaccctctactcctgcagcgaatgcggcgcgagcagcccgcgctgg
ctcggcaaatgcccgggctgcggggcctggaacacgctgatcgagaccgtgcccgatgcc
ggccccggcaagaaccgtctgagcggcgcgggccagtatgcgggcctggcgcaggcgcag
tcggtgatgccgctggccgccatcgaggccaccgaggtggcacgcacgcccagcggtatc
gaggagctcgaccgcgtgctcggcggcggcgtggtcgagggcggcgtggtgctcatcggc
ggcgacccgggcatcggcaagtccacgctgctgctgcaggccatggacgcgctgcagcgc
gtgggcctgcccacgctctacgtgacgggcgaggagagcggtgcgcaggtagcgctgcgc
tcgcgccgcctggggctggaggcgagccaggtgaacgtgctggccgagatccagctggag
aagatcctcgccaccatcgaggccacgcagcccgccgtggcggtgatcgactccatacag
accatctactccgaccagctcacgagcgcgccgggctcggtggcacaggtgcgcgaatgc
gccgcccacctcacgcggctggccaaggccacgggcatcgccgtggtgctggtgggccac
gtgaccaaggagggcgcgctggccggcccgcgcgtgctggagcacatggtggacacggtg
ctgtacttcgagggcgacacgcacagcagcttccgcctggtgcgcgccatcaagaaccgc
ttcggcgcggtgaacgagatcggcgtgttcgccatgaccgagcggggcctcaagggcgtg
gccaaccccagcgccatcttcctgtcgcagcacagcgagcccgtgcccggcagctgcgtg
ctggtcacgctggagggcacgcgcccgctgctggtggagatccaggcattggtcgatggc
ggcggcccgagcccgcggcgcctctcggtaggcctggagcgcgaccgcctggccatgctg
ctggcggtgctgcaccgccatgcgggcgtggcctgcgcggaccaggacgtgttcgtcaat
gccgtgggcggcgtgcgcatcagcgagcccgcggccgatttggcggtgatgctgtccatc
accagcagcctgcgcgggcgcgcgctgcccaaaggcttcatcgccttcggcgaggtaggc
ctggccggcgaggtgcgccccgcgccgcgcggccaggagcggctgaaggaggccgccaag
ctgggcttcaccgtggccgtggtgcccaaggcgaacgcgcccaaaaagcccatccccggc
ctggagatccacgccgtggagcgcgtggacgaggccatggccgccgtgcgcggcctgggc
tga
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