Alicycliphilus denitrificans BC: Alide_0405
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Entry
Alide_0405 CDS
T01397
Name
(GenBank) Beta-lactamase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn00550
Peptidoglycan biosynthesis
adn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Alide_0405
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
adn01002
]
Alide_0405
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
adn01011
]
Alide_0405
Enzymes [BR:
adn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Alide_0405
Peptidases and inhibitors [BR:
adn01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Alide_0405
Peptidoglycan biosynthesis and degradation proteins [BR:
adn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Alide_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
DUF4851
Motif
Other DBs
NCBI-ProteinID:
ADU98181
LinkDB
All DBs
Position
431980..433143
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AA seq
387 aa
AA seq
DB search
MKSLLSSLRSLACAALMAPAILWAQAPQPPEIAARNYLLVDVTAGQVLAAKDIDAPVEQA
SLTKLMTGYLVFDALRAKKITLEQRLPVSERAWKMPGSRMFIDPKMQVPVDDLLKGMIVQ
SGNDATMALAEGVGGTAENFVRLMNEQAKALGMKNTAYKNPEGLTEPGHTTTARDLATLA
TRLIQDFPEYMHYYSTKQYRYEGTPASNSNNRNTLLFRDPTVDGLKTGHTAAAGYCLVAT
SKRDFPNVGQRRLLSIVLGAASENSRANESQKLLNWGYTAFDAVKLFDAGQAADTPAVWK
GTQSTLKIGRPDAIVVTVPSGSAGKLSTEIVRKDPLIAPFTKGQPIGALKVRLGGEQVAE
VPLVALEDVGQAGIFGRAWDAIRLWIK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctctcctgtcctcgttgcgatcccttgcctgtgccgcgctgatggcgcccgcc
atcctctgggcccaggcgccccagccccccgaaatcgccgcgcgcaactacctgctggtg
gacgtgacggcaggccaggtgctggccgccaaggacatcgacgcgccggtggagcaggcg
tcgctgaccaagctcatgaccggctacctcgtgttcgacgcgctgcgcgccaagaagatc
acgctggagcagcgcctgcccgtgagcgagcgtgcctggaagatgccgggctcgcgcatg
ttcatcgaccccaagatgcaggtgccggtcgatgacctgctcaagggcatgatcgtgcag
tcgggcaacgatgccaccatggccctggccgagggcgtgggcggcacggcggagaacttc
gtgcgcctgatgaacgagcaggccaaggcgctgggcatgaagaacaccgcctacaagaac
cccgagggcctgaccgagcccggccacactaccacggcgcgcgacctggccacgctcgcc
acgcggctgatacaggacttccccgagtacatgcattactactccaccaagcaatatcgc
tacgagggcacgccggcctccaatagcaacaaccgcaacacgctgctgttccgcgacccg
acggtcgatggtctgaagaccggccacacggccgccgcgggctactgcctggtggccacg
tccaagcgcgacttcccgaacgtggggcagcgccgcctgctgtccatcgtgctcggcgcc
gccagcgagaattcccgcgccaacgaaagccagaagctgctgaactggggctacacggcg
ttcgacgccgtcaagctgttcgacgccggccaggccgccgacacgccggccgtctggaag
ggcacgcagagcacgctcaagatcggccgccccgacgccatcgtggtcactgtgccctcg
ggcagcgccggcaagctgagtaccgagatcgtgcgcaaggacccgctgatcgcgcccttc
accaagggccagcccatcggcgcgctgaaggtgaggctcggcggcgaacaggtggccgag
gtgcctctggtggctctggaggacgtggggcaggccggtatcttcggccgcgcctgggac
gccatccgcctgtggatcaagtag
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