KEGG   Alicycliphilus denitrificans BC: Alide_1106
Entry
Alide_1106        CDS       T01397                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
adn  Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:adn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:adn03032]
    Alide_1106
   03036 Chromosome and associated proteins [BR:adn03036]
    Alide_1106
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:adn02048]
    Alide_1106
Enzymes [BR:adn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Alide_1106
DNA replication proteins [BR:adn03032]
 Prokaryotic type
  DNA Topoisomerases
   Alide_1106
Chromosome and associated proteins [BR:adn03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Alide_1106
Prokaryotic defense system [BR:adn02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Alide_1106
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: ADU98870
LinkDB
Position
1172432..1174408
AA seq 658 aa
MAVKPSSASAYSEGSIRVLKGLEPVKQRPGMYTRTDNPLHIVQEVLDNAADEALAGYGKK
IKVTLHEDGSVSVEDDGRGIPFGLHPEEGAPVVELVFTRLHAGGKFDKGQGGAYSFSGGL
HGVGVSVTNALSTRLEVSTHREGQIARLAFAAGDVAEPLLARPLAAGERRQGTTVRVWPD
AKYFESAQLPMGELTHLLRSKAVLMPGVSVSLVNEKTRDQQAWQYKGGLADYLAQSLPAD
PVIPLFSGEGFADAGHDSFAEGEGAAWAVAFTEEGSPVRESYVNLIPTSAGGTHDSGLRD
GLFQAVKGFIELHALLPKGVKLLPEDVFARASYVLSAKVLDPQFQGQIKERLNSRDAVRL
VSSFVRPALELWLNQHVDYGKRLAELAIKAAQTRQRAGQKVEKKKGSGVAVLPGKLTDCE
SRDTAYNEVFLVEGDSAGGSAKMGRDKETQAILPLRGKVLNTWEVERDLLFRNNEVHDIS
VAIGVDPHGPHDSPDLSGLRYGKVCILSDADVDGAHIQVLLLTLFFRHFPRLIEAGRIYV
ARPPLYRVDVPARGKKPAAKLYALDEGELEAILDKAAKDGVPREKCQISRFKGLGEMNAE
QLWETTLNPDTRRLLPVQLGALDFAATEGLITKLMGKGEAASRRELMELHGDAVEVDI
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcagtcaaacccagctcagcatccgcgtattccgagggctcgatccgcgttctcaag
ggcctggagcccgtcaagcagcgcccgggcatgtacacccgcaccgacaaccccctgcac
atcgtccaggaggtgctggacaacgccgccgacgaggcgctggcgggctacggcaagaag
atcaaggtcacgctgcacgaggacggctcggtcagcgtggaggacgacggccgcggcatt
cccttcggcctgcaccccgaggaaggcgcgcctgtggtcgagctggtgttcacgcgcctg
cacgcgggcggcaagttcgacaaggggcaaggcggcgcctacagcttctcgggcggcctg
cacggcgtgggcgtgtcggtgacgaatgcgctctcgacccggctggaggtgtccacgcac
cgcgagggccagatcgcgcgcctggctttcgccgcgggcgacgtggccgagcccctgttg
gcccggcccctggcggcgggcgagcgccggcagggcaccacggtgcgcgtgtggcccgac
gcgaagtacttcgagtccgcgcagctgcccatgggcgagctcacccacctgctgcgcagc
aaggccgtgctcatgcccggcgtgtctgtgtcgctggtgaacgagaagacccgggaccag
caggcctggcagtacaagggggggcttgcggactacctcgcgcagagcctgccggccgac
ccggtgatcccgctgttcagcggcgagggcttcgccgacgcgggccacgacagcttcgcc
gagggcgagggcgcggcctgggccgtggccttcaccgaagagggatcgcccgtgcgcgag
agctacgtcaacctgatccccacgtccgccggcggcacgcacgacagcggcctgcgcgac
gggctgttccaggcggtcaagggcttcatcgagctgcacgcgctgctgcccaagggggtc
aagctgctgcccgaggacgtgttcgcccgcgccagctacgtgctctcggccaaggtgctg
gacccgcagttccagggccagatcaaggagcggctgaactcgcgcgacgccgtgcgcctg
gtgagcagcttcgtgcgcccggcgctggagctgtggctcaaccagcacgtggactacggc
aagcggctggccgagctggccatcaaggccgcgcagacccggcaaagggcaggccagaag
gtcgagaagaagaagggctcgggcgtggccgtgctgccaggcaagctgaccgactgcgag
agccgcgacaccgcgtacaacgaggtcttcctggtggagggcgacagcgccggcggcagc
gccaagatgggccgcgacaaggagacccaggccatcctgccgctgcgcggcaaggtgctc
aacacctgggaggtggagcgcgacctgctgttccgcaacaacgaggtgcacgacatctcg
gtcgccatcggcgtggacccgcacgggccccatgattcgcccgatctctcgggcctgcgc
tacggcaaggtctgcatcctgtcggacgccgacgtggacggcgcgcacatccaggtgctg
ctgctcacgctgttcttccgccatttcccccggctgatcgaggccggccgcatctacgtg
gcccgcccgcctctgtaccgcgtggacgtgcccgcgcgcggcaagaagcccgcggccaag
ctctacgcgctcgacgagggcgagctggaggccatcctcgacaaggccgccaaggacggc
gtgccgcgcgagaaatgccagatcagccgcttcaaaggcctgggcgagatgaacgccgag
cagctgtgggagaccacgctcaaccccgacacgcggcgcctgctgcccgtgcagctgggc
gcgctggacttcgccgccaccgaggggctcatcaccaagctcatgggcaagggcgaggcc
gcctcgcgccgcgagctcatggagctgcacggcgacgcggtggaagtggatatttga

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