Alicycliphilus denitrificans BC: Alide_1287
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Entry
Alide_1287 CDS
T01397
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn03420
Nucleotide excision repair
adn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Alide_1287
03430 Mismatch repair
Alide_1287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adn03400
]
Alide_1287
Enzymes [BR:
adn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Alide_1287
DNA repair and recombination proteins [BR:
adn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Alide_1287
MMR (mismatch excision repair)
Other MMR factors
Alide_1287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ADU99048
LinkDB
All DBs
Position
1354937..1357327
Genome browser
AA seq
796 aa
AA seq
DB search
MHSPESFPPAPAALLQGLNPEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLSTGHA
TPGGILAVTFTNKAAKEMLTRLSAMLPINVRGMWIGTFHGLCNRMLRAHHKLAGLPQSFQ
ILDTQDQLSAVKRLCKQFNVDEERFPPKQLAYFIAGCKEEGLRPRDVEAHDSDTRKKVEL
YQLYEEQCQREGVVDFGELMLRSFELLRDNDPVRVHYQRRFRHILVDEFQDTNRLQYAWL
KQLAGDVVDGRLVTQGSVIAVGDDDQSIYAFRGARVGNMQDFVREFDVRHQIKLEQNYRS
YSNILDSANALIAHNSRRLGKNLRTTQGPGEPVRVYEAPTDLAEAQWIVDEIRQLVREGP
MPRSEIAVLYRSNAQSRVIESALFNASVPYRVYGGLRFFERAEIKHALAYLRLLENPHDD
TSFMRVVNFPPRGIGARTLEQLQDAARGSGCSLHDAVSSVPGKAGVNLGAFVAMVDVMRE
QTQGRNLRAIIGQVLESSGLLEHYRNEKEGADRLENLDELISAAESFVTQEGFGRDAVAL
PLDETGAALTQSPASQGLDPNRPLLQQPLVDTDTGETLSPLAAFLTHAALEAGDNQAQAG
QDAVQLMTVHASKGLEFDCVFIGGMEEGLFPHENAMSDQGGLEEERRLMYVAITRARKRL
YLSHAQTRLLHGQTRYNVRSRFFDELPEEALKWLTPRQQGFGSYAPDSRAASAYGAGARA
GFGFNAAAFASPPVPPRKEEPAHGLRVGLAVFHTKFGEGKVLAIEGQGDDARAQVHFPRH
GTKWLALSVAKLTVVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcactccccagaatcgtttccgccggcgcctgcagcgctcctgcaaggcctgaatccc
gagcagctcgccgccgtcaccctgcccgcgggccatgcgctgatcctggcgggcgcgggg
tcgggcaagacgcgcgtgctcaccacgcgcatcgcctggctgctctcgaccggccatgcc
acgccgggcggcatcctggccgtcaccttcaccaacaaggcggccaaggagatgctcacg
cgcctgtccgccatgctgcccatcaacgtgcgcggcatgtggatcggcaccttccacggc
ctgtgcaaccgcatgctgcgcgcgcaccacaagctggccggcctgccgcagtcgttccag
atcctggacacgcaggaccagctctcggccgtcaagcgcctgtgcaagcagttcaacgtg
gacgaggagcgcttccccccgaagcagctcgcgtacttcatcgccggctgcaaggaggag
ggcctgcgcccgcgcgacgtggaggcgcacgactccgacacgcgcaagaaggtggaactc
taccagctctacgaggagcagtgccagcgcgagggcgtggtggacttcggcgagctgatg
ctgcgctccttcgagctgctgcgcgataacgaccctgtacgcgtgcactaccagcggcgc
ttccggcacatcctggtggacgagttccaggacaccaacaggctgcagtacgcctggctc
aagcagctcgcgggcgacgtggtggacgggcgcctggtcacccagggcagcgtgatcgcc
gtgggcgacgacgaccagagcatctacgcctttcgcggcgcgcgcgtgggcaacatgcag
gacttcgtgcgcgagttcgacgtgcgccatcagatcaagctggagcagaactaccgcagc
tacagcaacatcctggactcggcgaacgcgctgatcgcacacaacagccgccgcctgggc
aagaacctgcgcaccacgcaggggccgggcgagcccgtgcgcgtgtacgaggcgcccacc
gatctggccgaggcgcagtggatcgtggacgagatccggcagctcgtgcgcgagggcccg
atgccgcgcagcgagatcgccgtgctctaccgcagcaatgcgcagagccgggtcatcgaa
tcggccctgttcaacgccagcgtgccctaccgcgtgtacggcggcctgcgcttcttcgag
cgcgccgagatcaagcacgcgctggcctacctgcgcctgctggagaacccgcacgacgac
acgagcttcatgcgcgtggtcaacttcccgccgcgcggcataggcgcgcgcacgctggag
cagctgcaggacgccgcgcgcggcagcggctgctcgctgcacgacgcggtgagcagcgtg
cccggcaaggcgggcgtgaacctgggcgccttcgtggccatggtggatgtgatgcgcgag
cagacccagggccggaacctgcgcgccatcatcggccaggtgctggagtccagcggcctg
ctggagcactaccgcaacgagaaggagggcgcggaccggctggagaacctggacgagctc
atcagcgcggccgagagcttcgtcacccaggagggcttcggccgcgacgccgtggccctg
ccgctcgacgaaacgggcgcggcgctcacgcaaagccccgccagccaggggctggacccg
aaccggccgctcctgcagcagcccctggtggacaccgacacgggcgagacgctctcgccc
ctggccgccttcctcacgcatgcggcgctggaggcaggcgacaaccaagcccaggccggg
caggacgcggtgcagctcatgaccgtgcacgccagcaagggcctggagttcgactgcgtg
ttcatcggcggcatggaggagggcctgttcccgcacgagaacgccatgagcgaccagggt
ggcttggaggaagagcgccgcctgatgtacgtggccatcacccgcgcgagaaagcgcctg
tacctgagccacgcgcagacccgtttgctgcacggccagacgcgctacaacgtcaggagc
cgcttcttcgacgaactgcccgaggaggcgctcaagtggctcacgccccggcagcagggg
tttggctcttatgctcctgattcaagagctgcaagcgcttatggtgcgggcgccagggcc
ggttttggcttcaacgccgcggccttcgccagcccacccgtgccgccgcgcaaggaggag
cccgcccacggcctgcgcgtggggctggcggtgttccacaccaagttcggcgagggcaag
gtgctggccatcgaaggccagggcgacgacgcgcgcgcccaggtgcactttccgcgccac
ggtaccaagtggctggcgctgtcggtggccaagctcacggtggtcgagtag
DBGET
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