Alicycliphilus denitrificans BC: Alide_1894
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Entry
Alide_1894 CDS
T01397
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adn03400
]
Alide_1894
Enzymes [BR:
adn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Alide_1894
DNA repair and recombination proteins [BR:
adn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Alide_1894
Prokaryotic type
Alide_1894
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADU99638
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All DBs
Position
1949659..1951134
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AA seq
491 aa
AA seq
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MQQGATASALVWLRRDLRCDDHAALYHALRRFGRVYCAFVFDTDILDALPTRSDRRVEFI
HASVLELHQGLAELAARSGAPGGGLIVRHGPAPECIVRLARSLGVQEVLANRDYEPQAIE
RDRRVARALQAAGIAFSDYKDQALLDRDEVLTRQGRPYGVFTPYRRAWLQRLDAFQLTPY
PVASHARHLAAPPAGECLPTLQELGFARTNLHELPLPTGMRGAQQLLQDFMPRMAAYHEA
RDYPGRKGVSYLSVHLRFGTVSIRQLAALAAAQAAQGCEGAQAWLSELAWRDFYFMILWH
HPQVATQSFKPVYDRVQWDDAPELWQAWCGARTGYPLVDAAMRQLHQTGYMHNRLRMVVA
SFLTKDLGLDWRRGERHFAAHLNDYDLAANNGGWQWAASTGCDAQPWFRIFNPVTQSQKF
DPQGRFIRCYLPELARVPDAHIHFPAAMGPLELAACGLRLGVDYPLPVVDHARARERTLM
RFHFLGASEGG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagggggccacagcttctgccctggtatggctgcgccgcgacctgcgctgcgac
gaccatgccgcgctgtatcacgcgctacgccgctttgggcgggtgtattgtgccttcgtg
ttcgataccgacatcctggacgcgctgcccacgcgcagcgaccggcgcgtggagttcatc
cacgccagcgtgctggagctgcaccagggactggccgagcttgccgcccgaagcggcgcc
ccgggcggcgggctgatcgtgcgccatggcccggctccggagtgcatcgtgcggctggcg
cgcagcctgggcgtgcaggaggtgctggccaaccgcgactacgagccccaggccatcgag
cgcgaccggcgcgtggcccgggccctgcaggccgcgggcatcgccttcagcgactacaag
gaccaggcgctgctcgaccgcgacgaggtgctgacccggcagggccgaccctacggcgtg
ttcacgccctacaggcgcgcgtggctgcaaaggctcgacgccttccagctcacgccatac
ccggtggcgagccacgcccggcacctggccgcgccgcccgcgggcgagtgcctgcccacg
ctgcaggaactgggctttgcgcgcaccaacctgcacgagctgcccctgcccaccggcatg
cgcggcgcgcagcagctgctgcaggacttcatgccgcgcatggcggcgtaccacgaggcg
cgcgactaccccgggcgcaagggcgtgtcctacctgtcggtgcacctgcgcttcggcacc
gtgtccatccgccaactggcggcgctggcggccgcgcaggcggcccagggttgcgagggc
gcgcaggcctggctgtctgagctggcctggcgcgacttctacttcatgatcctgtggcac
cacccacaggtggccacgcagtcgttcaagcccgtgtacgaccgcgtgcagtgggacgac
gcgcccgagctctggcaggcttggtgcggggcgcgcaccggctacccgctggtcgatgcc
gccatgcgccagctgcaccagacgggctacatgcacaaccgcctgcgcatggtggtggcg
agctttctgaccaaggacttagggctggactggcgccggggcgagcgccatttcgctgcg
cacctgaacgactacgacctggcggccaacaacggcggctggcagtgggccgcctcgacc
ggctgcgacgcgcagccatggttccgcatcttcaaccccgtcacgcagtcgcaaaaattc
gacccgcagggccgcttcatccgctgctacctgcccgagctcgcgcgcgtgccggacgcg
cacatccactttcccgccgccatggggccgctggagttggcggcctgcggcctgcgcctg
ggggtggactatcctttgcccgtcgtggaccatgcccgggcgcgcgagcgcaccttgatg
cgctttcacttcctgggcgcgagcgagggcggctga
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