Alicycliphilus denitrificans BC: Alide_1942
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Entry
Alide_1942 CDS
T01397
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adn03016
]
Alide_1942
Enzymes [BR:
adn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Alide_1942
Transfer RNA biogenesis [BR:
adn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Alide_1942
Prokaryotic type
Alide_1942
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADU99685
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All DBs
Position
2010475..2011479
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AA seq
334 aa
AA seq
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MTERAPRVRVQRRPVHGVLLLDKPLGFSSNDALQKVKWLLRAEKAGHTGTLDPLATGVLP
LCFGAATKFSALQLDAPKTYEAIALLGTTTTTGDAEGEVLERRAVDPAQLTPERLAEVQR
QFTGPIRQVPPMHSALKKDGKALYEYARAGVEVERPARDVTIHALNLALTLAGQAQAAIK
ITVTCSKGTYIRTLGEDIGGALGCGAHLTFLRRLDTGGLGVERCVTLAQIEALDEDARLG
LLQPVQTLLAGHAVVTLGEQDAGRFLSGMRRRGPWPDAGAVAVYGERPHALLGVGHVLQG
ELIPDRLLSPLEIQQILQGAPRAHIERGTLETTL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcgcgctccccgtgtccgggtgcagcggcgcccggtgcacggagtgctgctg
ctcgacaaacccctgggcttttccagcaacgacgccttgcaaaaggtgaagtggctgctg
cgcgccgaaaaggctggccacaccggcacgctcgacccgctggcgaccggcgtgctgccg
ctgtgctttggcgcggcgaccaagttcagcgcgttgcagctggacgcgcccaagacctat
gaggccatcgccctgctgggcaccaccaccaccactggcgacgccgagggcgaggtgctg
gagcggcgcgccgtcgatcccgcccagctcacgcccgagcgcctggccgaggtgcagcgg
cagttcaccggccccatccgccaggtgccgcccatgcacagcgccctgaagaaggacggc
aaggcgctgtacgaatacgcgcgtgccggggtcgaggtcgagcgtcccgcgcgcgatgtc
acgattcatgcattgaatctggctctaacgcttgctggacaagcgcaagcagctatcaaa
ataacagtgacctgtagcaagggcacctacatccgcaccctgggggaggacataggcggg
gcccttggctgcggcgcgcacctcacctttctgcgccgcctggataccggtggcctgggt
gtggagcgctgcgtcacgctggcgcagatcgaggcgctcgacgaggacgcgcgcctgggc
ctgctgcagccggtgcagacgctgctggccggtcatgcggtcgtcaccctgggggagcag
gatgccgggcgcttcctctcgggcatgcgccgccgcggcccctggcccgatgccggcgcc
gtggccgtctacggcgagcgcccgcacgcgctgctgggcgtggggcacgtgctgcagggg
gagctgatccccgaccggcttctgagccccctggagatccaacagattctgcaaggcgcg
ccgcgcgcccacatagaacgcggcacattggaaacaacgctatga
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