Alicycliphilus denitrificans BC: Alide_2132
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Entry
Alide_2132 CDS
T01397
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Alide_2132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adn03400
]
Alide_2132
Enzymes [BR:
adn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
Alide_2132
DNA repair and recombination proteins [BR:
adn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Alide_2132
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Alide_2132
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Alide_2132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADU99872
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All DBs
Position
2179292..2180728
Genome browser
AA seq
478 aa
AA seq
DB search
MHTFLWHDYETFGTDTRRDRPAQFAAIRTDAQLNEIGEPLMLYCRPANDYLPDPQSCLIT
GITPQLCLEKGVPEHQFAARIEAELALPGTIGVGYNTIRFDDEITRFMFWRNLMDPYARE
WQNQCGRWDLLDVVRLAYALRPDGIEWPVADGKTSFRLENLTKANGLAHEAAHDALSDVR
ATIALARLVRARNPRLFDFALGLRKKDRVAAELRLPATAQTARPFLHVSGMFGAERGCLA
VMWPLASHPTNKNELLAWDLAHDPAELATLSADEIRQRLFTRAADLPEGVTRLPLKSVHL
NKSPMVVGNVNTLTPAVAQRWGLDMAQAARHAEAARRLPDMSAIWAQVFQRPQEGPVDVD
QDLYGGFLGNEDRRRLNRLRALSPEELARERPGFDDERLAELVWRYRARNFPQTLSPEEH
ERWEAHRVAMLVEGEGGGLTFDALFERLDELGEQADDERTEAILGAIYDYAEGIAPGM
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccttcctctggcacgactacgaaaccttcggaaccgacacgcgccgcgaccgg
ccggcgcagttcgcggccatacgcaccgatgcgcagctgaacgagatcggcgagccgctg
atgctgtactgccggccggccaacgactacctgccggacccgcagtcatgcctcatcact
ggcatcacgccgcagctgtgcctggagaagggcgtgcccgagcatcagttcgccgcgcgc
atcgaggccgagctggcgctgcccggcaccatcggcgtgggctacaacaccatccgcttc
gacgacgagatcacgcgcttcatgttctggcgcaacctcatggacccctacgcgcgcgag
tggcagaaccagtgcggccgctgggacctgctggacgtcgtgcgcctggcctacgcgctg
cgcccggacggcatcgagtggcccgtggccgatggcaagaccagcttcaggctggagaac
ctgacgaaggccaacggcctggcgcacgaggccgcgcacgacgcgctgtcggacgtgcgc
gcgacgatagcgctggcgcggctcgtgcgcgcgcgcaatccccggctgttcgacttcgcg
ctcggcctgcgcaagaaggaccgcgtggcggccgagctgcgcctgcccgccaccgcgcag
acggcccggccgttcctgcatgtctcgggcatgttcggcgccgagcgcgggtgcctggcc
gtgatgtggccgctggccagccaccccacgaacaagaacgagctgctggcctgggaccta
gcgcacgacccggccgagctggccacgctttccgccgacgagatccgccagcgcctgttc
acgcgcgcggccgacctgcccgagggcgtcacgcgcctgccgctcaagagcgtgcacctg
aacaagtcgcccatggtggtgggcaacgtgaacacgctcacgcccgccgtggcccagcgc
tggggcctggacatggcgcaggccgcgcggcacgccgaggccgcgcgccggctgcccgac
atgagcgccatctgggcccaggtgttccaaaggccgcaggaggggcccgtggacgtggac
caggacctgtacggcggcttcctcggcaacgaggaccgccggcgcctgaaccgcctgcgc
gcgctctcgcccgaagagctcgcgcgcgagcgccccgggtttgacgacgagcgcctggcc
gagctggtctggcgctaccgcgcgcgcaacttcccgcagacgctctcgcccgaggagcac
gagcgctgggaggcgcaccgcgtcgccatgctggtggagggcgagggcggcggcctgacc
ttcgacgccctgttcgagcgcctggacgagctgggcgaacaagccgacgacgagcgcacc
gaggccatcctgggcgccatctacgactatgccgaaggcatcgcccccggcatgtga
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