Alicycliphilus denitrificans BC: Alide_2200
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Entry
Alide_2200 CDS
T01397
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adn03009
]
Alide_2200
Enzymes [BR:
adn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Alide_2200
Ribosome biogenesis [BR:
adn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Alide_2200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RrnaAD
TRM5-TYW2_MTfase
MTS
Methyltransf_23
Methyltransf_11
TPMT
bHLH_NPAS4
Methyltransf_12
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADU99936
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Position
2244646..2246097
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AA seq
483 aa
AA seq
DB search
MSDPIATHLPPEPQHPLPPGWLEVTSMDMDAQGVARKSDGKVVFIDGALPTELVSANTHR
KKNNWEQASLTEIHRESSLRVRPGCPHFGLHAGACGGCKMQHLDAGAQVAMKQRVLEDNL
WHLAKVKAETILRPIEGPAWGYRYRARLSVRYVPKKGTVLVGFHERKSRYIADMQTCKIL
PPHVDAMLMPLRALIAGMQARDTCPQIELACGDAVTALVLRHLEPLSDADKDRLRAFAAE
HGVQWWLQPKGPDTVHLLDEGGEQLAYGLPDFGITMPFKPTDFTQVNPHINRVLVTRALR
LLDAREDERVIDWFCGLGNFTLPIATRSREVLGVEGSEALVARSRENYQKNQAQRQAGKA
LAATNFVARNLFEMTPEVLIADGAADKWLVDPPREGAFALSKALADIHQARLGAAEAPPL
PAGHERWQPPRRIVYVSCNPATLARDAGLLVHQAGYRCAAAGVVNMFPHTAHVESMAVFE
RAA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccccattgcaacccatctaccacccgaaccccagcaccctctgccgcccggc
tggctcgaagtcacgtccatggacatggacgcccagggcgtggcgcgcaagagcgacggc
aaggtcgtgttcatcgacggcgccctgcccaccgaactggtcagcgccaacacccatcgc
aagaagaacaactgggagcaggccagcctcaccgagatccaccgcgaatccagcctgcgc
gtgcggcccggctgtccgcatttcggcctgcacgcgggcgcctgcggcggctgcaagatg
cagcacctggatgccggcgcgcaggtggccatgaagcagcgcgtgctggaggacaacctc
tggcacctggccaaggtgaaggccgagaccatcctgcgccccatcgaggggccggcctgg
ggctaccgctaccgcgcgcgcctgtcggtgcgctacgtgcccaagaagggcacggtgctg
gtgggctttcacgagcgcaagagccgctacatcgccgacatgcagacctgcaagatcctg
ccgccgcacgtggacgccatgctcatgccgctgcgtgccctgatcgccggcatgcaggcg
cgcgacacctgcccgcagatcgagctggcctgcggcgacgcggtcacggccctggtgctg
cgccacctggagccgctgtccgacgccgacaaggacaggctgcgcgccttcgcggccgag
catggcgtgcaatggtggctgcagcccaaggggccggacaccgtgcacctgctcgacgag
ggcggcgagcagctcgcctacgggctgccggacttcggcatcaccatgcccttcaagccc
acggacttcacccaggtcaacccgcacatcaaccgcgtgctggtcacgcgcgcgctgcgt
ctgctggatgcgcgcgaggacgagcgcgtgatcgactggttctgcggcctgggcaacttc
acgctgcccatcgccacccgctcgcgcgaggtgctgggcgtggagggcagcgaggcgctg
gtcgcccgctcgcgcgagaattatcagaagaatcaggcccaaaggcaggctggtaaagcg
ctggcagctaccaatttcgttgcgcgcaacctgttcgagatgacgcccgaggtgctgatc
gccgacggcgcggccgacaaatggctggtcgatccgccgcgcgagggcgcattcgccctg
tccaaggcgctggctgacatccaccaggcgcgcctgggcgccgcggaggcgccgccgctg
cccgcggggcacgagcgctggcagccgccccggcgcatcgtctacgtgagctgcaacccc
gccacgctggcgcgcgacgcgggcctgctggtgcaccaggcgggctaccgctgcgcggcg
gcgggcgtggtcaacatgttcccgcacacggcccatgtggagagcatggcggtgttcgag
cgggcggcttga
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