KEGG   Alicycliphilus denitrificans BC: Alide_2598
Entry
Alide_2598        CDS       T01397                                 
Name
(GenBank) AlkA domain protein
  KO
K13529  AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Organism
adn  Alicycliphilus denitrificans BC
Pathway
adn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:adn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Alide_2598
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:adn03000]
    Alide_2598
   03400 DNA repair and recombination proteins [BR:adn03400]
    Alide_2598
Enzymes [BR:adn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     Alide_2598
Transcription factors [BR:adn03000]
 Prokaryotic type
  Helix-turn-helix
   AraC family
    Alide_2598
DNA repair and recombination proteins [BR:adn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Alide_2598
SSDB
Motif
Pfam: AlkA_N Ada_Zn_binding HTH_18 HTH_AraC HhH-GPD RecR_HhH HTH_23 HHH
Other DBs
NCBI-ProteinID: ADV00331
LinkDB
Position
2676402..2677901
AA seq 499 aa
MPSDFRADDDDARYLALKARDARFDGRFFTGVTSTGIYCRPVCAVRTPRRENCRFFALAA
QAESAGFRPCLRCRPELAPQALAWSVQDASGILVRQALRLLDAPEAWGAEGGGALVAQLA
ARLGVSDRHLRRIFGEALGVSPLQYLQTRRLLAAKQLLTDTALPVTQVALASGFASVRRF
NAAFGAHYGLNPTQLRRQGAPAGGAGRPVRLGYRPPYDAAALLGFLAARRIHGMEEVEGL
ALRRTVRLRAGGAAYTGWIGARFDPGRPLVLLEASPGLLPALPQVIARVRALLDLDADPG
PINAALHAAFPGGDGLRVPGAWDGFELAVRAVLGQQITVAAARTLAQRLVERFGEPVQTP
WPGLDRLFPAPAVLAAAQGDALGQLGIVRQRQAAIVALAQAVDGGRIALHAGSDVDATLA
ALRQLPGIGDWTAQYIAMRALRWPDAFPAGDVALHKALAVQGAPQPARAALAAAQAWRPW
RSYGVIRAWAGLAAPLPNL
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgccctccgattttcgcgccgacgatgacgacgcccgctacctggccctgaaggcgcgc
gacgcgcgcttcgacgggcgcttcttcacgggcgtcacgtccaccggcatctactgccgc
cccgtctgcgccgtgcgcacgccgcggcgcgagaactgccgcttcttcgcgctggccgcg
caggccgagagcgcgggcttccggccctgcctgcgctgccggccggagctcgcgccgcag
gcgctcgcgtggtcggtgcaggacgcctcgggcatcctcgtgcggcaggcgctgcggctg
ctggacgcgcccgaagcctggggcgcggaaggcggcggcgccctggtggcgcagctggcc
gcgcgcctgggcgtgagcgaccggcatctgcgccgcatcttcggcgaggcgctgggcgtc
tcgcccctgcaatacctgcagactcgccgcctgctggccgccaagcagctgctgaccgac
acggccctgcccgtcacccaggtggcgctggccagcggcttcgcaagcgtgcggcgcttc
aacgcggccttcggcgcgcactacgggctcaaccccacgcagctgcgccgccagggcgcg
ccggcgggcggcgccggccggccggtgcggctgggctaccggccgccctacgacgcggcg
gcgctgctgggcttcctcgcggcgcggcgcatccacggcatggaagaagtcgagggcctg
gcactgcgccgcaccgtgcggctgcgggccggcggcgcggcgtacactggctggatcggc
gcgcgcttcgaccccggccggcccctggtgctgctggaggccagccccggcctgctgccc
gctctgccccaggtgatcgcccgcgtgcgcgcgctgctcgacctggacgccgatcccggg
cccatcaacgccgcgctgcacgccgcattccccgggggcgacggcctgcgcgtgccgggc
gcgtgggacggctttgaactggccgtgcgcgccgtgctgggccagcagatcacggtggcg
gccgcgcgcacgctcgcgcagcggctggtggagcgcttcggcgagcccgtccagacgccc
tggccgggactggatcggctgttccccgcgcccgccgtgctcgcggcggcgcagggcgac
gcgctcgggcagctcggcatcgtgcgccagcggcaggcggccatcgtggcgctggcgcag
gccgtggacggaggccggatcgccctgcacgcgggcagcgacgtggacgccaccctggcc
gcgctgcgccagctgcccggcatcggcgactggacggcccagtacatcgccatgcgcgcg
ctgcgctggcccgacgccttccccgccggcgacgtggcgctgcacaaggccctggccgtg
caaggcgcgccgcagcccgcgcgcgcggccctcgcggcggcgcaggcctggcggccctgg
cgcagctacggcgtgatccgggcctgggcgggcctggcggcaccgctcccgaacctatag

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