Alicycliphilus denitrificans BC: Alide_2993
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Entry
Alide_2993 CDS
T01397
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn00906
Carotenoid biosynthesis
adn01100
Metabolic pathways
adn01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Alide_2993
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
adn01006
]
Alide_2993
Enzymes [BR:
adn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Alide_2993
Prenyltransferases [BR:
adn01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Alide_2993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ADV00719
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All DBs
Position
3103239..3104078
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AA seq
279 aa
AA seq
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MNPDQYVQQKAAASGSSFYYAFLFLPRQRRAAITAFYAFCREVDDVVDDVSDASVAQAKL
AWWQGEVAQAFAGRPSHPVMQALMPHVPAYGIEQGQLQAVIEGCQMDLEQTRYLDFAGLA
RYCHLVAGVVGEVAAHIFGQTDARTTAYAHKLGLAFQLTNIIRDVGEDAMRGRIYLPISE
LQQFDVKAHEITRREYSDRFTALMRFQAERAHRLYDEALALLPDADRRAQKPGLMMASIY
RTLLREIEADGFQVLHQRTSLTPLRKFWLAWKMQALGRM
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaccagtacgtgcagcaaaaggcggccgcctccggcagcagcttctactac
gcctttctgttcctgccacgccagcgccgcgcggccatcacggccttctacgccttctgc
cgtgaagtggacgacgtggtggacgacgtctccgacgcgagcgttgcccaggccaagctc
gcctggtggcaaggcgaggtggcgcaggccttcgccggccggcccagccacccggtgatg
caggcgctgatgccgcacgtgcccgcctatggcattgagcagggccagttgcaggccgtg
atcgagggctgccagatggacctggagcagacgcgctacctcgacttcgcgggcctggcg
cgctactgccacctggtggccggcgtggtgggcgaggtggcggcgcacatcttcgggcag
accgacgcgcgcaccaccgcatacgcccacaaactggggctggcgttccagctcaccaac
atcatccgcgacgtgggcgaggatgccatgcgcgggcgtatctacctgcccatctccgag
ctgcagcaattcgacgtcaaggcgcacgagatcacccggcgcgagtattcggaccgcttc
accgcgctcatgcgcttccaggccgagcgcgcccataggctctacgacgaggccctggcc
ctgctgcccgacgccgaccgccgcgcgcagaagcccggcctgatgatggcgagcatctat
cgcacgctgctgcgcgagatcgaggccgacggcttccaggtactgcaccagcgcaccagc
ctcacgccgctgcgcaagttctggctggcgtggaagatgcaggcgctcgggcgcatgtag
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