Alicycliphilus denitrificans BC: Alide_3024
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Entry
Alide_3024 CDS
T01397
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adn03009
]
Alide_3024
Enzymes [BR:
adn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Alide_3024
Ribosome biogenesis [BR:
adn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Alide_3024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADV00750
LinkDB
All DBs
Position
complement(3137852..3138589)
Genome browser
AA seq
245 aa
AA seq
DB search
MQLQDILYSQGFGTRRICAGLIQQGWVAVHSAGSLEPVVCLEPAQNLKEQGLVLRVQGQD
WPYHAKAYVMLNKPAGTECSQKPSAYPSVYTLLPAPLRQRPGKSAVSGVQAVGRLDQDTT
GLLLLSDDGQFIHRMSSPKKHVPKVYQVTVRHPVDAAQVECLLAGVVLDDDPKPVRAVAC
VQRDAHRIDLTLTEGKYHQVKRMIAAVGNRVEALHRARIGGLELPADMAPGQWRWLGLDE
LALLK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcagctccaagacatcctctattcgcaaggtttcggaacccgccgcatttgcgcgggc
ttgattcaacagggctgggtggccgtgcacagtgccggctcgctggagccggtcgtttgc
cttgagccggcacagaatctcaaggagcaggggctggtgttgcgtgtacaaggccaggac
tggccgtatcacgccaaggcctatgtgatgctgaacaagcctgccggcacggaatgttcc
cagaagccctctgcctatcccagcgtgtatacgctgctgcccgctccgctgcggcagcgg
cccggcaagagtgccgtgagcggggtgcaggccgtggggcggctggaccaggacacgacg
ggcctgttgctgctcagtgacgatgggcaattcatccatcgcatgagttccccgaaaaag
catgtgccgaaggtgtaccaggtgacggtcaggcatcccgtcgatgcggcgcaggtcgag
tgcctgttggccggcgtggtgctcgatgacgaccccaaacctgtgcgtgcggtggcctgt
gtgcaacgtgacgcgcaccggatcgacctgaccttgaccgagggcaagtatcaccaggtc
aagcgcatgatcgcggcggtgggcaatcgcgtggaggccctgcatcgcgcccgcatcgga
gggctggagctcccggcggacatggcgccgggccaatggcgctggctgggcctggatgag
cttgcgctgttgaaatga
DBGET
integrated database retrieval system
