KEGG   Alicycliphilus denitrificans BC: Alide_3173
Entry
Alide_3173        CDS       T01397                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
adn  Alicycliphilus denitrificans BC
Pathway
adn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:adn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Alide_3173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:adn03019]
    Alide_3173
   03009 Ribosome biogenesis [BR:adn03009]
    Alide_3173
   03036 Chromosome and associated proteins [BR:adn03036]
    Alide_3173
Enzymes [BR:adn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Alide_3173
Messenger RNA biogenesis [BR:adn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Alide_3173
Ribosome biogenesis [BR:adn03009]
 Eukaryotic type
  90S particles
   RNase
    Alide_3173
 Prokaryotic type
  rRNA processing factors
   Alide_3173
Chromosome and associated proteins [BR:adn03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Alide_3173
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM Pyruv_OxRed_insertion
Other DBs
NCBI-ProteinID: ADV00895
LinkDB
Position
complement(3307810..3308496)
AA seq 228 aa
MPPDSLPALQQRLQHMFSDPSLLQRAVTHRSFSADHNERLEFLGDSVLNLAVSSLLFKRM
QGLPEGELSRVRALLVRQESLHGIAVRLQLPQVLRLGEGESRSGGKMRPSILADALEAVI
GAVYLDAGYEQAQALVHRLFEGVELSPRLQEAAKDAKTALQEWLQGRKMSLPQYRVVQTT
GVAHKQVFHVACEVPALQLAERGSGASRRAAEQAAAAAMLAQLKAKHA
NT seq 687 nt   +upstreamnt  +downstreamnt
gtgccgcccgacagcctcccggcgctgcagcagcggctgcagcacatgttctccgatccc
tcgctgctgcagcgtgccgtcacgcaccgcagcttctcggccgaccacaacgagcgcctg
gagttcctcggcgactcggtgttgaacctggccgtctccagcctgctgttcaagcgcatg
cagggcctgcccgaaggcgagctctcgcgcgtgcgcgccttgctggtccggcaggagtcg
ctgcacggcatcgccgtgcgcctgcagctgccgcaggtgctgcgcctgggcgagggcgaa
tcgcgctccggcggcaagatgcgcccctccatcctggccgatgcgctggaggccgtcatc
ggcgccgtctacctggacgcgggttacgagcaggcccaggccctggtccaccgcctgttc
gagggcgtggagctgagcccgcgcctgcaggaggccgccaaggatgccaagacggcgttg
caggagtggctgcagggtcgcaaaatgagcctgccgcagtaccgcgtggtgcagaccacg
ggggtcgcgcacaagcaggtgttccacgtcgcatgcgaggtcccggcgctgcagctggcc
gagcgcggcagcggcgcgtcgcgccgcgcggccgaacaggcggcggctgccgccatgctg
gcccaactgaaagcaaagcacgcatga

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