Alicycliphilus denitrificans BC: Alide_3195
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Entry
Alide_3195 CDS
T01397
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
adn03009
]
Alide_3195
Enzymes [BR:
adn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Alide_3195
Ribosome biogenesis [BR:
adn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Alide_3195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Orexin
Motif
Other DBs
NCBI-ProteinID:
ADV00917
LinkDB
All DBs
Position
complement(3326600..3327619)
Genome browser
AA seq
339 aa
AA seq
DB search
MKHIIGGKPAQGRAPVEAPAARIVEVDAESAGQRLDNFLIRHLKGVPKTHVYRIIRSGEV
RLNKGRTSADARVAAGDRVRLPPVRVSDKVQDKAERPAPAREFPILLEDEHLIALDKPAG
VAVHGGSGVSFGVIEQLRQARQEARFLELVHRLDRETSGILLVAKRRSALKHLQDQFRER
ETGKTYLALVPGAWPANKKVIDLPLHKYLQEDGERRVRVTTPQDSDGMRSITLVKVHSHL
PARPLQGLPAMSLLEVTIKTGRTHQIRVHLASQGHPIAGDDKYGDFDLNRRLQKQGLRRM
FLHAWRLQFDHPASGERMELRAELPPELAAFLSTGHIDA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacacattatagggggcaaacccgcccagggcagggccccagtcgaagcccctgcg
gcacgcatcgtcgaggtcgatgccgagtctgcgggccagcggctcgacaacttcctgata
cgccacctcaagggcgtgcccaagacccacgtctaccgcatcatccgcagcggcgaggtg
cgcctgaacaagggccgcaccagcgccgacgcgcgcgtggccgcgggcgaccgggtgcgc
ctgccgcccgtgcgcgtgtcggacaaggtgcaggacaaggccgaacgccccgcgcccgcg
cgcgaattcccaatcctgctggaggacgagcacctcatcgcgctcgataagcccgccggc
gtggccgtgcacggcggcagcggcgtgagcttcggcgtgatcgagcagctgcgccaggcc
cggcaggaggcgcgcttcctggagctggtgcaccggctggaccgcgagacctcgggcatc
ctgctcgtggccaagcggcgctcggcgctcaagcacttgcaggaccagttccgggagcgc
gagaccggcaagacctacctggccctggtgccgggcgcctggcctgccaacaagaaggtc
atcgacctgccgctgcacaaatatctgcaggaggatggcgagcgccgcgtgcgcgtcacc
acgccccaggactccgacggcatgcgctccatcaccctggtcaaggtgcacagccacctc
cccgctcgcccgctgcaggggctgcccgcgatgagcctgctggaggtgaccatcaagacc
gggcgcacgcaccagatccgcgtgcacctggcctcccagggccacccgatcgcgggcgac
gacaaatacggcgacttcgacctgaaccggcgcctgcagaagcagggcctgaggcgcatg
ttcctgcacgcatggcgcctgcagttcgaccacccggccagcggcgagcgcatggagttg
cgcgccgagctgccgcccgagctggcggcctttctttccacaggacatatcgatgcctga
DBGET
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