Alicycliphilus denitrificans BC: Alide_3360
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Entry
Alide_3360 CDS
T01397
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Alide_3360
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
adn01007
]
Alide_3360
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adn03016
]
Alide_3360
Enzymes [BR:
adn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Alide_3360
Amino acid related enzymes [BR:
adn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Alide_3360
Transfer RNA biogenesis [BR:
adn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Alide_3360
Prokaryotic type
Alide_3360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
HisK-N-like
FapA
YlqD
WXG100
DUF1664
T3SSipB
Baculo_PEP_C
PCRF
Snf7
TMF_TATA_bd
HIP1_clath_bdg
UPF0449
Motif
Other DBs
NCBI-ProteinID:
ADV01080
LinkDB
All DBs
Position
complement(3511216..3512532)
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AA seq
438 aa
AA seq
DB search
MLDILLLRKDLASAVARLETRKKPQAFLNVEAFQALESERKTIQTRTEELQSRRNQLSKQ
IGQLMGKGEKDAAEAAKAQVAAIKEELDGSAARLEQIQSELQAMLAAVPNLPHESVPVGS
DEAGNVEVRRWGTPRDFGFAVKDHVDLGAPLGLDFDMGAKLSGSRFTVMKGPIARLHRAL
AQFMLDVQTGEHGYTECYVPYIVNADSLRGTGQLPKFEGDLFAAKKGGQEGEPVPDDAQL
YLIPTSEVPLTNLVRGEVVPESALPIRLTAHSPCFRSEAGSYGRDTRGMIRQHQFDKVEM
VQIVHPDKSYEALEEMTRHAEAVLQKLGLPYRVVCLCTGDMGFGSAKTYDLEVWLPAQGT
YREISSVSNCEAFQARRMQARFKNAQGRNELVHTLNGSGLAVGRTLVAVLENCQQADGSI
AIPEVLRPYMGGLERLAA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacatcctcctccttcgcaaagacctcgcatcggccgtcgcccggctggaaacc
cgcaagaagccccaggccttcctgaacgtggaggcgttccaggccctcgaatccgagcgc
aagaccatccagacgcgcaccgaggagctgcagtcccggcgcaaccagctgtccaagcag
atcggccagctcatgggcaagggcgagaaggacgcggccgaggccgccaaggcccaggtg
gccgcgatcaaggaggagctcgacggctccgccgcgcgcctggagcagatccagtccgag
ctgcaggccatgctcgccgccgtgcccaacctgccgcacgagagcgtgcccgtgggcagc
gacgaggcaggcaacgtcgaggtgcgccgctggggcacgccccgcgacttcggcttcgcc
gtgaaggaccacgtggacctgggcgcgccgctgggtctcgatttcgacatgggcgcgaag
ctctcgggctcgcgcttcaccgtgatgaagggccccatcgcccgcctgcaccgcgcgctt
gcgcaattcatgctcgacgtgcagaccggcgagcacggctacaccgagtgctacgtgccc
tacatcgtcaatgccgactcgctgcggggcacgggccagctgccgaagttcgagggcgac
ctgttcgcggccaagaagggcggccaggagggcgagcccgtgcccgacgacgcccagctc
tacctcatccccaccagcgaggtgccgctgaccaacctcgtgcgcggcgaagtggtgccg
gagagcgcgctgcccatcaggctcacggcgcactcgccgtgcttccgctccgaggccggc
agctacggccgcgacacgcgcggcatgatccgccagcaccagttcgacaaggtcgagatg
gtgcagatcgtgcatcccgacaagagctacgaggcgcttgaagagatgacgcgccatgcc
gaggccgtcctgcagaagctgggcctgccctaccgcgtggtgtgcctgtgcaccggcgac
atgggcttcggcagcgccaagacctacgacctggaggtctggctgcccgcgcagggcacc
taccgcgagatcagctcggtatccaactgcgaggccttccaggcgcgccgcatgcaggcg
cgcttcaagaacgcgcagggcaggaacgaactggtgcacacgctcaacggctcgggcctg
gccgtgggccgcacgctggtggcggtgctggagaactgccagcaggccgacggcagcatt
gccatccccgaggttttgcgcccctacatgggcgggctggagcggctcgcggcctga
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