Alicycliphilus denitrificans BC: Alide_3691
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Entry
Alide_3691 CDS
T01397
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn00730
Thiamine metabolism
adn01100
Metabolic pathways
adn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Alide_3691
Enzymes [BR:
adn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Alide_3691
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADV01407
LinkDB
All DBs
Position
complement(3840471..3842318)
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AA seq
615 aa
AA seq
DB search
MNAPDSFSQLLARTREPFPASAKSFITGSRPDLRVPVRDIRLTNGEVVSVYDTSGPYTDP
AATIDVRRGLQSVRGAWIEERGDSEVYEGRKPVALDDGQRSEDAARLAALRLEAAALQRQ
PRRAKAGANVTQMHYARRGIVTPEMEYVALRENGRREWMAQYLQDAAREKRLAGNPLGAS
IPQVITPEFVRDEVARGRAIIPANINHPEVEPMAIGRNFLVKINANIGNSAVTSSIEEEV
EKLVWAIRWGADNVMDLSTGKNIHTTRDWIVRNSPVPIGTVPIYQALEKVGGIAEDLTWE
IFRDTLVEQAEQGVDYFTIHAGVRLAYIHLTAARRTGIVSRGGSIMAKWCMAHHKESFLY
EHFEDICDIMKQYDVAFSLGDGLRPGCASDANDEAQFAELHTLGELTQVAWKHDVQTMIE
GPGHVPMHMIQANMTEQLKTCHEAPFYTLGPLTIDIAPGYDHIASAIGAAMIGWMGTAML
CYVTPKEHLGLPDRDDVKQGIIAYKIAAHAADVAKGHPGARARDDALSQARFDFRWQDQF
NLGLDPETAQEYHDETLPKDAAKVAHFCSMCGPKFCSMKITQEVREFAQQGLQEKAAEFN
RAGGELYVPIHPVRG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgattcgttttcccagctgctggcccgcacgcgcgagccttttcccgcc
tcggccaagtccttcatcaccggcagccgccctgacctgcgcgtgccggtgcgcgacatt
cgcctgaccaacggcgaggtggtgagcgtctacgacacctcgggcccctacaccgatccc
gccgccacgatcgacgtgcggcgcggcctgcagagcgtgcgcggcgcctggatcgaggag
cgcggcgacagcgaggtttacgaaggccgcaagccggtggcgctcgacgatgggcaaagg
agcgaggacgccgcccgactggcggccctgcgcctggaggccgccgccctgcagcgccag
ccgcgccgcgccaaggccggggccaacgtcacgcagatgcactacgcgcgccgcggcatc
gtcacgcccgagatggagtacgtggcgctgcgcgagaatggcaggcgcgagtggatggcg
caatacctgcaggacgccgcccgcgagaagcgcctggccggcaacccgctgggcgccagc
atcccccaggtcatcacccccgagttcgtgcgcgacgaggtggcgcgcggccgcgccatc
atcccggccaacatcaaccaccccgaggtggagcccatggccatcgggcgcaacttcctc
gtgaagatcaacgccaacatcggcaactcggccgtcacctccagcatcgaggaagaggtg
gaaaagctcgtctgggccatccgctggggcgccgacaacgtgatggacctgtccaccggc
aagaacatccacaccacgcgcgactggatcgtgcgcaactcgcccgtgcccatcggcacc
gtgccgatctaccaggcgctggaaaaagtgggcggcatcgccgaggacctcacctgggaa
atcttccgcgacaccctggtcgagcaggccgagcagggcgtggactacttcaccatccac
gcgggcgtgcgcctggcctacatccacctcacggcggcgcggcgcaccggcatcgtctcg
cgcggcggctccatcatggccaagtggtgcatggcgcaccacaaggagagcttcctctac
gagcacttcgaggacatctgcgacatcatgaagcagtacgacgtggccttcagcctgggc
gacggcctgcgccccggctgcgcgtccgatgccaacgacgaggcccagttcgccgagctg
cacacgctgggcgaactgacccaggtggcctggaagcacgacgtgcagaccatgatcgaa
ggccccggccacgtgcccatgcacatgatccaggccaacatgaccgagcagctcaagacc
tgccacgaggcgccgttctacaccctcggccccctgaccatcgacatcgcgcccggctac
gaccacatcgcctcggccatcggcgccgccatgatcggctggatgggcacggccatgctg
tgctacgtgacgcccaaggagcacctgggcctgcccgaccgcgacgatgtgaagcaaggc
atcatcgcctacaagatcgccgcgcacgccgccgacgtcgccaagggccacccgggcgcg
cgcgcgcgcgacgacgcgctcagccaggcgcgcttcgacttccgctggcaggaccagttc
aacctgggcctggaccccgagaccgcgcaggagtaccacgacgagaccctgcccaaggac
gcggccaaggtggcgcatttctgctccatgtgcgggccgaagttctgctccatgaagatc
acgcaggaggtgcgcgaattcgcccagcagggcctgcaggaaaaagccgcggagttcaac
cgcgcgggtggcgagctctacgtgcccatccatccggtccggggctga
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