Alicycliphilus denitrificans BC: Alide_3708
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Entry
Alide_3708 CDS
T01397
Name
(GenBank) UDP-N-acetylmuramoylalanine/D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn00470
D-Amino acid metabolism
adn00550
Peptidoglycan biosynthesis
adn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Alide_3708
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Alide_3708
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
adn01011
]
Alide_3708
Enzymes [BR:
adn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Alide_3708
Peptidoglycan biosynthesis and degradation proteins [BR:
adn01011
]
Precursor biosynthesis
Amino acid ligase
Alide_3708
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
2-Hacid_dh_C
Oxidored_nitro
3HCDH_N
Pyr_redox
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ADV01424
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Position
complement(3859880..3861661)
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AA seq
593 aa
AA seq
DB search
MNDERPDPLNPETPAPEAAAPAAAPAFDYQAPAVSAADQAKEFVARIFSDMGGAEEPAAQ
PQQPPQEEAGAAPESESRLPAIHPGEALGYMAGRRVLVLGLGTSGLAMARWCARCGAQVT
VADTRENPPQLAQLRAELPQLEFIAGPFGAALVEGHALDAVYRSPGLAPTDVAPVVIAAS
ARQIIVGGELSLYSEALHELRTRHGYAPAVLAITGTNGKTTVTSLTGLLVDCAGKSVAVA
GNIGPTLLDTLGERLDAGQLPEVWVLELSSFQLDGAQGFEPTAATVLNVTQDHLDWHGSM
QAYAQAKARIFGAAGLMILNRDDPLVMDMLPPPVRVKLQKPQLRAHVTFGGDMPQRPGDF
GIEVVSGMAWLVRAHDADETARRGKVQEAELHVQRLMPADALRIRGRHNALNALAALALA
QAAGCALAPMLYGLREYRGEPHRVEPVGMVREVEYFDDSKGTNVGATVAALTGLGADRRL
VLILGGDGKGQDFSPLAAPVARYARAAVLIGRDAPQIRAALEGCGVPLLDAATLPEAVQL
ASQRAHAGDAVLMSPACASLDMFDNYGHRARVFVAAVQALAEDAGQPLEGGHA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgagcgccccgatcccctgaaccccgagacgcccgctcccgaagcggcggcc
ccggcggctgcgcccgcgttcgactaccaggcaccggccgtttccgccgcggaccaggcc
aaggagttcgtcgcgcgcatcttctcggacatgggcggcgccgaagagcccgccgcgcag
ccgcagcagcccccgcaggaagaggccggcgccgcgcccgaaagcgaaagccggctcccg
gccatccaccccggcgaggctctcggctacatggcgggccgccgcgtgctggtgctgggg
ctgggtacctcgggcctggcgatggcgcgctggtgcgcgcgctgcggcgcgcaggtgacg
gtggccgacacgcgcgagaacccgccgcagctcgcccagctgcgcgccgagctgccgcag
ctcgaattcatcgccgggcccttcggcgccgcgctggtcgagggccacgcgctggatgcg
gtctaccgctcgccgggcctggcgccgaccgatgttgctcctgtcgtgatagctgcaagc
gcacgtcagataatcgttggaggcgaattaagcttgtattccgaagcgctgcacgagctg
cgcacgcgccacggctacgcacccgccgtgctcgccattacgggtaccaacggcaagacc
acggtcacctcgctcaccggcctgctcgtcgactgcgcgggcaagagcgtggccgtggcc
ggcaacattggccccacgctgctggacacgctgggcgagcgcctggatgcgggccaactg
cccgaggtctgggtgctggagctgtcgagcttccagctcgacggcgcgcagggcttcgag
cccacggctgctaccgtgctcaacgtcacgcaggaccacttggactggcacggcagcatg
caggcctatgcccaggccaaggcgcgcatcttcggggcggcgggcctgatgatcctgaac
cgcgacgacccgctcgtcatggacatgctgccgccgcccgtgcgcgtgaagctgcagaaa
ccccagctgcgcgcccacgtgaccttcggcggcgacatgccgcagcgccccggcgacttc
ggcatcgaggtggtgagcggcatggcctggctcgtgcgcgcgcatgatgccgacgagaca
gcgcgccgtggcaaggtgcaggaggccgagctgcacgtgcagcgcctcatgcccgccgac
gcgctgcgcatccgcggccgccacaacgcgctgaacgcgctggccgcgctggcgctcgca
caggcggcgggctgcgcgctcgcgcccatgctctacggcctgcgcgaataccgcggcgag
ccgcaccgcgtggagcccgtgggcatggtgcgcgaggtggagtacttcgacgacagcaag
ggcaccaacgtgggcgccaccgtggccgcgctcaccggcctgggcgcggaccggcgcctg
gtgctcatcctgggcggcgacggcaagggccaggacttctcgccgctggccgcgcccgtg
gcgcgctacgcccgcgcagcggtgctgatcggccgcgacgcgccgcagatccgcgccgcg
ctcgaaggctgcggcgtgccgctgctcgatgccgcgacgctgcccgaggccgtgcagttg
gccagccagcgcgcccatgcgggcgacgcggtgctgatgtcgccggcctgtgccagcctg
gacatgttcgacaactatggccaccgcgcccgggtgttcgtcgcggccgtgcaggcgttg
gccgaggacgcgggccagccgctcgaaggggggcacgcatga
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