Alicycliphilus denitrificans BC: Alide_4004
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Entry
Alide_4004 CDS
T01397
Name
(GenBank) DNA topoisomerase
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adn03032
]
Alide_4004
Enzymes [BR:
adn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Alide_4004
DNA replication proteins [BR:
adn03032
]
Prokaryotic type
DNA Topoisomerases
Alide_4004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ADV01710
LinkDB
All DBs
Position
4178134..4179306
Genome browser
AA seq
390 aa
AA seq
DB search
MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEVYDAALKRWS
LEQLPIIPQQWRVEVKPKTATQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYR
GPIERLWLSALNDASIRTALAKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRQ
AGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVSLSAGGQTFTAQWVAPDAST
DDAGRCLRQPVAQQAAQQIRAAGSAQVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDV
QETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPTLAQIMGQLDRTQ
RSRAWNDGKVVDFHAKLTHHFHRILTHPDS
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgtttctgtgcgagaagccctcccagggcaaagacatcggccggattctcggc
gccacgcagcgcggtgaaggctgcctcaacggctccggtgtcacggtcacctggtgcatc
ggccatctcgtcgaagcggcagcacccgaggtctatgacgcggcgctcaagcgctggtcg
ctggaacagctgcccatcattccccagcagtggcgggtcgaggtcaagccgaagaccgcc
acgcaattcaaggtcgtcaaagcgcttctggcgaaggcgacccagcttgtcatcgccact
gacgccgaccgcgaaggcgaactgatcgcacgcgagatcatcgacctgtgcggctaccgc
ggtcccatcgaacgcctgtggctgtcggcgctcaacgatgcgtccatccgcaccgcgctc
gccaagctgcggccctcggccgagacgctgccgatgtattactcggcgctggcgcgctcg
cgcgccgactggctcgtgggcatgaacctcagccggctgttcaccgtgctcgggcggcag
gccggctacgatggcgtgctgtcggtcgggcgtgtacagaccccgacgctcaaactcgtg
gtggaccgcgaccgagagatcgcggccttcgtgtccgtgccgtactgggccatcgacgtg
tcgctgtccgcaggcggtcagacgttcaccgcgcagtgggtggcacccgatgccagcacc
gacgacgccggccgctgcctgcggcagcccgtcgcacagcaggccgcgcagcagatccgc
gccgcgggcagtgcccaggtggtgtcggtcgagaccgagcgcgtgcgcgaaggcccgccg
ctgctgttcgacctgggcaccttgcaggaagtctgttccaagcagcttgggctggacgtg
caggaaaccttggagatcgcccaggccctgtacgagacgcacaaggccacgacgtacccg
cgctcggattcgggctacctgcccgaaagcatgttcgccgaagtgcccacggtcctggac
agcctgctcaagaccgatcccacgctggcccagatcatgggccagctcgaccgcacccag
cgctcgcgcgcctggaacgacggcaaggttgttgatttccatgcaaagctgacccaccat
ttccatcgaatcttgacccaccctgattcgtga
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