Alicycliphilus denitrificans BC: Alide_4384
Help
Entry
Alide_4384 CDS
T01397
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
adn
Alicycliphilus denitrificans BC
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adn03400
]
Alide_4384
DNA repair and recombination proteins [BR:
adn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Alide_4384
Archaeal homologous recombinant proteins
Alide_4384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_29
AAA_23
AAA_15
SbcC_Walker_B
ABC_tran
MukB
EXOC6_Sec15_N
AAA_22
AAA_27
AAA_28
AAA_18
NACHT
cobW
Motif
Other DBs
NCBI-ProteinID:
ADV02082
LinkDB
All DBs
Position
4596363..4599200
Genome browser
AA seq
945 aa
AA seq
DB search
MFHLQTLELVHWDYCQRVSLPLDASIITIAGPNGSGKTTLLDAMRTLLGLRCSAPRDYRT
YARHAGAQTAWLRAVVDNRPQGRQSSSRPFARRLLYSDQVTLACRIDRNGGDWQRRYCLL
EGDASIERLVDTPEKDLGFMGVEAWGRMLAAAGLSPAIARVLSLEQGQTDRLCEFSPREL
LRLVFDVFGDQQVLDAYDQAREHQQQLAREMAQAERELDHSRAQLSELHNRVTSYKTWQL
RLAERERLATEVLPVLAWWGEREQLARQSRELRRQKAQHRAALAEQAVQNKRLLHLLQES
AHAQQQAEQLRGERDQARGQLDAATRHEAPLEQLAKREQELLALVDKGSNADDLQAHLAQ
LQGQEAALQDERGQLTQRRKLAAAQLAALEGLSLPPLPPEVQRFRKTLASQGIGHRFVAE
VVEVVEERWRAAIEGVLRGHRWVVVLDKSQDLAEAWEVGERERYRHYIVEPGSVALKGEP
GTLLEHVKFTAPVPRWLVQQLQNLRCVADPREGKRLGGTWITPQAYMHDGRGARSMWVEA
HEHQFGAAAVHARRSAAERELARIDAQLAPVLDELMALKRQIADTKNALAGHSAAEELVR
RSEEFAQARGDLPAARQARIAAAQLWQKLEQESTRAHDRHRAFADEHKRLEGHLQRARGD
SERAAQDWSARRRQHAGAVARSQQQRAQFPARWIAPGAIAALVGEYMNDTQARLRLHAVE
QELEQGSWEQDATVEERHRRMDVTVREQAASLSDHQVKNAQAATAVLNARESYIEVLRST
VRRYRKNIQELGQLAGVEVAADLPLLENDDTVLAQAGLKVHFAFDGKGSIGLNDGEASGG
QQVIKSLILLVGLLKDEESGSGGFVFIDEPFAHLDVRNIQLVGHFLRSTRAQYVLTTPIT
HNLEVFEPAEITLVTSKKPRDARWAPPIAVAKRRGAPELRPMMAA
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtgtttcacctgcaaaccctagaactcgtccactgggactactgccagcgcgtctcgctg
ccgctggacgcctccatcatcaccatcgccgggccgaacggctcgggcaagaccacgctg
ctggacgccatgcgcacgctgctgggcctgcgctgctcggccccgcgcgactaccgcacc
tacgcgcgccacgcgggcgcgcagaccgcgtggctgcgcgccgtggtggacaaccggccg
caggggcggcaaagctccagccggccgttcgcgcgccggctgctctacagcgaccaggtc
acgctggcctgccgcatcgacaggaacggcggcgactggcagcgccgctactgcctgctg
gagggcgacgcatccatcgagcggctggtggacacgcccgagaaagacctgggcttcatg
ggcgtggaagcctggggccgcatgctggccgccgccggcctgtcgccggccatcgcgcgc
gtgctctcgctggagcaggggcagaccgaccggctgtgcgaattcagcccgcgcgagctg
ctgcgcctcgtcttcgacgtgttcggcgaccagcaggtgctggacgcctacgaccaggcg
cgcgagcaccagcagcaattggcgcgcgagatggcgcaggccgagcgcgagctggaccac
agccgcgcacagctttccgaactgcacaaccgcgtgaccagctacaagacatggcagctc
aggctggccgagcgcgagcgcctggccaccgaggtgctgcccgtgctcgcctggtggggc
gaacgcgagcagctcgccaggcagtcgcgcgagctgcgccgccagaaggcccagcaccgc
gcggccctggccgagcaggcggtgcagaacaagcgcctgctgcacctgctgcaagagagc
gcccacgcccaacagcaggccgagcagctgcgcggcgagcgcgaccaggcgcgcggccag
ctggacgcggccacgcgccacgaggcgccgctggagcagctggccaagcgcgagcaggaa
ctgctggccctggtggacaagggcagcaatgcggacgacctgcaggcccacctggcgcag
ctgcagggccaggaagccgcgctgcaggacgagcgcggccagctcacccagcgccgcaag
ctggccgccgcgcagctcgccgcgctggaaggcctgagcctgccgccgctgccgcccgag
gtgcagcgctttcgcaagaccctggccagccagggcataggccaccgcttcgtcgccgaa
gtcgtcgaggtggtggaagagcgctggcgcgccgccatcgagggcgtgctgcgcggccac
cgctgggtggtggtgctggacaagagccaggatctggccgaggcctgggaggtcggcgag
cgcgagcgctaccgccactacatcgtcgagccgggcagcgtggccctgaagggcgagccg
ggtacgctgctggagcatgtgaaattcaccgcccccgtgccgcgctggctggtgcagcag
ctgcagaacctgcgctgcgtggccgacccgcgcgagggcaagcgcctgggcggcacctgg
atcacgccgcaggcctacatgcacgatgggcgcggcgcgcgctccatgtgggtggaggcg
cacgagcaccagttcggcgccgcggccgtgcacgcacgccgcagcgccgccgagcgcgag
ctggcgcgcatcgacgcgcagctcgcgcccgtgctcgacgagctgatggcgctcaagcgc
cagatcgccgacacgaagaacgccctggccggccacagcgccgccgaggagctggtgcgg
cgcagcgaggaattcgcccaggcacgcggcgacctgccggccgcccgccaggcgcgcatc
gccgccgcccagctatggcagaagctggagcaggaaagcacgcgcgcccacgaccgccac
cgcgcctttgccgacgagcacaagcgcctggaaggacacctgcagcgcgcccgcggcgac
agcgagcgcgccgcgcaagactggagcgcacgccggcgccagcacgccggtgccgtggcg
cgcagccagcagcagcgcgcgcagttcccggcccgctggatcgcgcccggcgccatcgcc
gcgctggtcggcgaatacatgaacgacacccaggcccgcctgcgcctgcacgccgtggag
caagagctggagcagggcagctgggagcaggacgccaccgtggaggaacgccaccgccgc
atggacgtgacggtgcgcgagcaggccgcgagcctctcggaccaccaggtcaagaacgcc
caggccgcgaccgccgtgctgaacgcgcgcgagagctacatcgaggtgctgcgcagcacc
gtgcgccgctaccgcaagaacatccaggagctgggccagctcgcgggcgtggaggtggcg
gccgacctgccgctgctggagaacgacgacaccgtgctggcccaggccggcctgaaggtg
cacttcgcgttcgacggcaagggcagcatcgggctgaacgacggcgaggcatcgggcggg
cagcaggtcatcaagtcgctgatcctgctggtgggcctgctcaaggacgaggaaagcggc
tcgggcgggttcgtcttcatcgacgagccgttcgcgcacctggacgtgcgcaacatccag
ctcgtcggccacttcctgcgcagcacgcgcgcgcagtacgtgctgaccacgcccatcacg
cacaacctggaggtgttcgagcccgccgagatcaccctggtgacgagcaagaagccgcgc
gacgcacgctgggcgccgccgatcgcggtggccaagcggcgcggcgcgccggagctcagg
cccatgatggccgcctga
DBGET
integrated database retrieval system
