Alicycliphilus denitrificans BC: Alide_4428
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Entry
Alide_4428 CDS
T01397
Name
(GenBank) TRAG family protein
Organism
adn
Alicycliphilus denitrificans BC
Pathway
adn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
adn00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Alide_4428
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ADV02249
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All DBs
Position
pALIDE02:complement(7874..9787)
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AA seq
637 aa
AA seq
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MKIKMNNAVGPQVRTAKPKPSKLLPVLGAASMVGGLQAATQFFAHTFAYHATLGPNVGHV
YAPWSILHWTYKWYSQYPDEIMKAGSMGMLVSTVGLLGVAVAKVVTSNSSKANEYLHGSA
RWAEKKDIQAAGLLPRERNVLEIVTGKAAPTATGVYVGGWQDKDGNFFYLRHSGPEHVLT
YAPTRSGKGVGLVVPTLLSWGASSVITDLKGELWALTAGWRQKHAKNKVLRFEPASTSGG
VCWNPLDEIRLGTEYEVGDVQNLATLIVDPDGKGLDSHWQKTAFALLVGVILHALYKAKD
DGGTATLPSVDAMLADPNRDIGELWMEMATYGHVDGQNHHAIGSAARDMMDRPEEEAGSV
LSTAKSYLALYRDPVVARNVSRSDFRIKQLMHEDDPVSLYIVTQPNDKARLRPLVRVMVN
MIVRLLADKMDFEGGRPVAHYKHRLLMMLDEFPSLGKLEIMQESLAFVAGYGIKCYLICQ
DINQLKSRETGYGHDESITSNCHVQNAYPPNRVETAEHLSRLTGQTTVVKEQITTSGRRT
AAMLGQVSRTYQEVQRPLLTPDECLRMPGPKKNAQGEIEEAGDMVIYVAGYPAIYGKQPL
YFKDPVFSARAAIPAPKVSDRLRAVAQAETEGEGITI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaagatgaacaacgcggtagggccgcaagtccgaaccgccaaaccgaagccg
agcaagctgctgccggtgctgggcgcggcctcgatggtcggcggcctccaggccgcgacg
cagttcttcgcccacacgttcgcctatcacgcgaccctcggccccaacgtgggccacgtg
tacgcgccctggtcgatcctgcactggacgtacaagtggtacagccagtacccggacgag
atcatgaaggccggcagcatggggatgctggtttcgaccgtgggcctgctgggcgtggcc
gtggcgaaggtcgtcacgtccaacagctcgaaggcgaacgagtacctgcacggctcggcc
cgctgggccgagaagaaggacattcaggcggccggcctgctgccacgcgagcgcaacgtc
ctggagatcgtcaccggcaaggccgcacccacggctaccggcgtgtacgtgggcggctgg
caggacaaggacggcaatttcttctacctgcggcacagcggccccgagcacgtgctgacc
tacgcgcccacgcgctcgggcaagggcgtcggcctggtggtgcccacgctgctgtcgtgg
ggcgcgagcagcgtcatcaccgacttgaagggcgagttgtgggccttgaccgccggctgg
cggcagaagcacgccaagaacaaggtgctgcgcttcgagccggccagcacctcgggcggc
gtctgctggaatccgctggacgaaatccgcctcggcaccgaatacgaggtgggtgacgtg
cagaaccttgccacgctgatcgttgacccggacggcaagggcctggactcgcactggcag
aagaccgccttcgcgctcctggtcggcgtgatcctgcacgcgctgtacaaggccaaggac
gatggcggcaccgccacgctgccgtccgtcgatgcgatgctggccgacccgaaccgggac
attggcgagctttggatggaaatggcgacctacgggcacgtagacggccagaaccatcac
gccatcggctcggcggcccgcgacatgatggatcggcccgaggaagaagccggatcggtg
ctgtccacggccaagtcgtacctggccctgtaccgcgaccccgtggtggcccgcaacgtc
agccggtcggatttccgcatcaagcagttgatgcacgaggacgacccggtaagcctctac
atcgtcacccagcccaacgataaggcccgcctgcggccgctggtgcgcgtcatggtgaac
atgatcgtgcgcctgctggccgacaagatggacttcgagggcggccggccggtggcgcac
tacaagcaccggctcttgatgatgctggacgagttcccgagcctcgggaagctggagatc
atgcaagagtcgctggccttcgtggccggctacggcatcaagtgctacctcatctgccag
gacattaaccagctcaagagccgcgagacgggttacggccacgacgaaagcatcacgtcg
aactgccacgtgcagaacgcctacccgcccaaccgcgtcgagacggccgaacacctgtcc
cgcctcaccgggcagaccaccgtggtgaaggagcagatcacgaccagcggccgccgcacg
gcggcgatgctgggccaggtgtcgcgcacttaccaggaagtgcagcggcccttgctgacg
cccgacgaatgcctgcgcatgccggggccaaagaagaacgcccagggcgagatcgaagaa
gccggcgacatggtgatctacgtcgcgggctacccggcgatctacggcaagcaacccctg
tacttcaaagacccagtgttctcggcacgcgccgcgatccctgcgcccaaggtcagcgac
cgcctgcgcgccgtcgcacaggccgagacggaaggggagggcatcacgatatga
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