Tsuneonella dongtanensis: A6F68_01974
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Entry
A6F68_01974 CDS
T04466
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ado
Tsuneonella dongtanensis
Pathway
ado03030
DNA replication
ado03430
Mismatch repair
ado03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ado00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A6F68_01974 (dnaE1)
03430 Mismatch repair
A6F68_01974 (dnaE1)
03440 Homologous recombination
A6F68_01974 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ado03032
]
A6F68_01974 (dnaE1)
03400 DNA repair and recombination proteins [BR:
ado03400
]
A6F68_01974 (dnaE1)
Enzymes [BR:
ado01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A6F68_01974 (dnaE1)
DNA replication proteins [BR:
ado03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A6F68_01974 (dnaE1)
DNA repair and recombination proteins [BR:
ado03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A6F68_01974 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
T2SSK
COE1_HLH
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ANY20482
UniProt:
A0A1B2AEA3
LinkDB
All DBs
Position
1990347..1993817
Genome browser
AA seq
1156 aa
AA seq
DB search
MAFAPFVPLRVMSSYSMLEGAIDPKAIARLAKDRGFPAIAICDRNGLYGVMAFAKACFDL
GIQPIIGTLLGIARDGSGQTIDHLPLFAQDEAGYDNLCDLVSRAHLARPTELPAHVTLDD
LAGRTDGLIALTGAGEGGLTRLLADGRSDDAEALCDQLEGLFPGRLYIELARRSSSVCDA
AEDALIDLAYARDLPLVATNPANFADPHFHPAHDAMLCIANSTHVDAAERPRSNPEAFVK
SAPMMEELFADLPEATANTLVIAKRCAFAPPKRDPILPSLAGDLEGEARMLAEDSRKGLA
ARLEKYGAIPDEELRVYVDRLEFEIGVINQMGFPGYFLIVADFIKWAKDNGIPVGPGRGS
GAGSLVAWALTITDLDPIKLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQAKYGD
DHVAQIITFGKLKARAVLRDAGRILQMSYGHVDRLCKMVPNHPTDPWTLPRTLNGVSEFK
REYDNDDDVRRLIDLAMQLEGYPRNSSTHAAGVVIGDRPLAKLVPLYRDPRSDMPVTQFD
MKHVESAGLVKFDFLGLKTLSVLQKAVELLAKRGVAIDLSALPLDDPRVYDLMKSGNTVG
VFQLESEGMRRTLTAVKPTNFGDIIALVSLYRPGPMDNIPLFGKRKAGEVPIEYPHPKLE
GVLAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKVQAEMDAQRQRFVDGCAEV
SQIPSRQANELFDLIDKFAGYGFNKSHAAAYALLAYQTGWLKAHYPEEFYAASMCFDMHQ
SDKLAAFVDDARRSGIEVAPPDVNRSEAEFTVERTDEGYAVRYALAGIKNVGEKAMEALV
AEREANGWFESLEDLFQRLPKGSLNSRQLEGLIAAGALDKLEPNRAKLFANADLLLAVSE
AANRERESGQAGLFGGDAQPETALRLKDADEWPRSERMAMERENFGFYFSAHPVEQYRAI
ASANGARSFASLMEAGAPNGGRAPAVMAAMVEKVNKGRTRKGKDFVRADFSDSSGQFSAA
CFEESLVANFVKWAEEGTCVLLNVELDSPSPDEPPRVTVRGARPLRDVKAAARMVLSLDV
TAAEAIEALKAELLHGPDGKGEVRLRLRTGSESDPTVRLGRDFHLDGELAERLASIEGLA
NVQLTTQRGPNLRLVA
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggccttcgctccctttgtgccgctgcgcgtcatgtcgagctactcgatgcttgaggga
gcgatcgatcccaaggcgattgcgcggctcgcaaaagatcgcggctttccggccatcgcc
atctgcgatcgcaacggcctctacggggtgatggcatttgcgaaggcgtgtttcgatctc
ggcatccagccgatcatcggcacgcttctcggcatcgcccgagatgggtctggccagacg
atcgatcacctgcccctctttgcgcaggacgaggctggctacgacaacctttgcgacctg
gttagccgggcacacctggctcggccgaccgagctgccggcgcatgtcacgctcgatgat
ctcgccgggcgcaccgatggtctgatcgccttgaccggtgccggcgagggcggcctgact
cgtctgctggctgatggtcgctcggacgatgcggaagcgctttgcgaccaacttgaagga
ctatttccggggcgcctctatatcgagctggcccggcgcagttcctctgtgtgcgacgcg
gccgaagacgcgctcatcgacctcgcatatgcccgcgacctccctctggtcgcaacgaac
ccggcaaatttcgccgatccgcattttcatccggcgcacgacgcgatgttgtgcatcgcg
aattcgacccatgtcgatgcggccgagcggccgcgctccaacccggaagccttcgtgaag
tcggcgccgatgatggaggagttgttcgccgacctgcccgaggcgacggcaaacacgctg
gtgatcgcgaaacgctgcgcctttgcgccacccaagcgggacccgatcctgcccagtctc
gccggcgacctcgagggcgaggcgcggatgctggccgaagattcgcgcaagggtctcgca
gcgaggctggagaagtacggtgcgatccccgacgaggagttgagggtttacgtcgaccgc
ctcgaattcgagatcggcgtgatcaaccagatgggtttcccgggttacttcctgatcgtt
gccgacttcatcaaatgggccaaggacaacgggatacccgttgggccggggcgcggttcg
ggcgccggttcgctcgtcgcctgggcgctgaccatcaccgatctcgacccgatcaagctg
ggcctgctcttcgaacgcttccttaatcccgaacgcgtctcgatgccggacttcgacatc
gacttctgcgaaactcgtcgcggcgaagtcattcgctatgtgcaggccaagtacggcgac
gatcacgtcgcgcagatcatcacattcggcaagctgaaggcgcgcgctgtgctgcgtgac
gcgggtcgaatcctgcagatgagctacggccacgtcgaccggctgtgcaagatggtgccc
aaccatccgaccgacccgtggactcttccgcggacgctcaacggggtgtccgagttcaag
cgcgaatacgacaacgacgacgacgtgcgtcgtctgatcgacctcgcgatgcagctcgaa
gggtacccgcgcaacagctctacccacgccgcgggcgtggtcatcggcgaccggccattg
gcgaaactggtcccgctctatcgcgacccgcgatcggatatgcccgtcacccagttcgac
atgaagcatgtcgaaagcgcagggctggtgaaattcgacttcctcggcctcaagacgctg
tccgtgttgcagaaggcggtcgaactgctggcgaagcgtggggtcgcgatcgacctgtcg
gcgctgccgctcgacgacccgcgggtctatgacctgatgaagagcggtaacacagtgggc
gtgttccagctggaatccgaaggcatgcggcgcacgctgaccgctgtgaagccgaccaat
ttcggcgacatcatcgcgctggtttcgctctatcggccggggccgatggacaacattccc
ctgttcggcaagcgcaaggccggggaggtgccgatcgagtacccgcaccccaagctggag
ggtgtgctcgccgaaacatacggcatcttcgtctatcaggaacaggtgatgcaggcggcg
caaatcctcgccggctactcactgggcgatgcggacctcctgcgccgcgcgatgggcaag
aaggtgcaagccgaaatggacgcgcagcgtcagcgtttcgtcgacggctgcgccgaagtt
tcgcagatcccgtctcgccaggccaacgagctgttcgacttgatcgacaagttcgcaggt
tacggcttcaacaagtctcacgccgccgcctacgccctgctggcctatcagactggttgg
ctcaaggcgcattaccccgaagagttctacgccgcgtccatgtgcttcgacatgcaccag
tcggacaagctggccgcattcgtcgacgacgcaaggcgatccgggatcgaggtggcgcct
cccgacgtgaaccgctcggaggcagagttcaccgtcgagcgaaccgacgaggggtacgcc
gtccgctatgccctggcaggcatcaagaacgtcggcgagaaggcgatggaggcgctggtc
gcagagcgagaggcgaacgggtggttcgaatccctcgaggacctgtttcagcgcttgccg
aaggggtcgctcaattcgcgccagctcgaaggattgatcgcggcgggtgcactcgacaag
cttgagcccaaccgtgccaagcttttcgccaatgccgatctcctgttggcggtcagcgaa
gccgccaatcgtgagcgggaaagcgggcaggcggggcttttcggcggcgatgcgcaaccc
gagaccgctctccgcctgaaagacgccgacgaatggccgcgatccgagcgcatggccatg
gagcgggaaaacttcggcttctacttctctgcgcatccggtcgaacagtaccgggccatc
gcttccgccaacggcgcgcgcagtttcgcttcgctgatggaagcgggtgcgccaaacggc
gggcgcgctccggcagtgatggcggccatggtcgagaaggtaaacaaaggccggacgcgg
aagggcaaggacttcgtgcgggccgacttctccgacagctcagggcaattctccgcggcc
tgtttcgaggagtcgctggtggccaacttcgtgaagtgggccgaagaaggcacctgcgtc
ctgctcaacgtcgagctcgacagtcccagcccggacgaaccaccccgggtgaccgttcgc
ggcgcacggcccttgcgggatgtgaaagctgcagcgcggatggtgctcagccttgacgtc
accgccgcggaagcgatcgaggcgctcaaggcggagctgttgcacggccccgatggcaag
ggcgaagtgcgcctgcggctgcggaccggtagcgagagcgatcccacggtgcggcttggc
cgcgatttccatctggacggggagctcgccgagcgcttggcaagcatcgagggacttgcc
aatgtgcagctgacaacccagcgcggaccgaatctgcgactggtcgcctga
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