Actinobacillus delphinicola: NCTC12871_00197
Help
Entry
NCTC12871_00197 CDS
T06572
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
adp
Actinobacillus delphinicola
Pathway
adp03420
Nucleotide excision repair
adp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12871_00197 (uvrD)
03430 Mismatch repair
NCTC12871_00197 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adp03400
]
NCTC12871_00197 (uvrD)
Enzymes [BR:
adp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12871_00197 (uvrD)
DNA repair and recombination proteins [BR:
adp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12871_00197 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC12871_00197 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
VEJ08782
UniProt:
A0A448TS19
LinkDB
All DBs
Position
1:complement(207462..209651)
Genome browser
AA seq
729 aa
AA seq
DB search
MDISDLLDGLNEKQREAVAAPLGNYLVLAGAGSGKTRVLTHRVAWLIGVEDVPENHIMAV
TFTNKAAAEMRSRIEQTLHKTGNERQLFGMWVGTFHSIAHRILRTYYNDANLPQDFQILD
SEDQLRLVKRLMKLHEYDEKDYPHKQACWFINHQKEEGRRPKDLGVAKDPHERTWIEIYR
LYQDACDRAGLVDFSELLLRAYELWKNNPLILQHFQRRFTQILVDEFQDTNFIQYEWIKL
LAGNTGNVMIVGDDDQSIYGWRGAKVENIQFFLRDFPQAQTIRLEQNYRSTGNILKSANE
LISHNTDRLGKELWTADGAGEPVGIYAAFNELDEALFVATQIEKWREEKGKLSDCAILYR
SNSQSRVLEDALLKMKIPYRIYGGLRFFERQEIKDALAYLRLIANVQDDAAFERVINTPT
RGIGERTMDILRNLTRERQITLWQAMEIAIEEQYLTSRAATSLLRFAELIQNLRTETQSM
TLAAQTDFVIKHSGLYGMYEKEKGDKGEVRIENLEELVTAAKEFEKPEDAEGLSDLTAFL
THASLEAGEGQAEAHQDGVQMMTLHAAKGLEFSRVFIVGMEEGLFPSGRSFEEAGRLEEE
RRLAYVGITRAKILLTLCHAESRRLYGKDEIHRRSRFIEELPQECLQEIRLRGKVTRAYN
QNAVGSIKSTPMLNTSEWKMGQKVQHAKFGKGSIINVEGSGEHTRLQIAFQGEGIKWLIA
KLAKLEKLN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcagatttacttgatgggttaaatgagaaacaacgtgaggccgttgcggca
ccgcttggcaattatttagtgcttgcaggagcaggaagcggtaaaacacgagtacttacg
catcgtgtcgcttggttaattggggtggaagatgtgccagaaaatcatattatggcagtt
acttttaccaataaagcagccgcagaaatgcgttctcgtattgagcagacattgcataaa
acaggaaatgagcgtcaattatttggtatgtgggtgggcactttccatagtattgcacac
cgaattttgcgtacctactacaatgatgcaaacctgccacaagatttccaaatccttgat
tcagaggatcagcttcgtctagtaaaacgattaatgaaacttcatgaatatgacgaaaaa
gattacccgcataagcaagcatgttggtttattaatcaccaaaaggaagagggacgcaga
ccgaaagatctgggcgtggctaaagatccgcatgagcgcacatggatcgaaatttatcgc
ctctatcaagatgcgtgtgatcgtgcagggttagttgatttttctgaattattgttacga
gcttacgaattatggaaaaataatccattgattttacaacatttccaacgacgctttaca
caaattcttgtggatgagttccaagatactaacttcattcaatacgaatggatcaagtta
cttgctgggaatacgggaaatgtgatgatcgtaggggatgatgatcagtctatttatggt
tggcgtggtgcaaaagtagaaaatattcaatttttcttgcgtgattttcctcaagcacaa
actattcgcttggaacaaaattatcgttcaacagggaatatcttaaaaagtgccaacgaa
ttaatctctcacaacacggatcgcctgggcaaagaattatggacagcggatggcgcaggg
gaacccgttggaatttatgctgcttttaatgaattggatgaagcattatttgtggcaacg
caaattgaaaaatggcgtgaagaaaaagggaaattatctgattgtgccattttgtatcgt
agcaatagtcaatcccgtgtgcttgaagatgccttgcttaagatgaaaattccatatcgt
atttatgggggattacgcttctttgaacgccaagaaattaaagatgctttggcgtattta
cgccttattgcgaatgtacaagatgatgcagcgtttgaacgcgtgattaacacgccaaca
agaggtatcggtgaacgcacgatggatatattgcgtaatttaacccgtgaacgtcaaatt
accttatggcaagccatggaaatcgcgattgaagagcaatatctaacaagccgtgctgcg
acatctttactccgatttgccgaattgatccaaaatttgcgtactgaaacccaatctatg
acactagccgcccaaacggactttgtgattaaacattctggcttgtatggaatgtacgaa
aaagaaaaaggcgataagggcgaagttcgcattgagaacttggaagaattagtgaccgct
gctaaagaatttgaaaaacctgaagatgcggaaggtttaagtgatttaacagcctttcta
acgcatgcctcccttgaagctggcgaaggtcaagcagaggcgcatcaagacggcgtacag
atgatgacgcttcatgcagcaaaagggctggaattttctcgtgtctttattgttggaatg
gaagaaggattattcccaagtggacgttcttttgaagaggcggggcgattagaagaagaa
cgccgtttagcttatgttgggattacacgagctaaaattttgctaacattatgccatgct
gaaagccgacgtttgtatggtaaagacgaaattcatcgccgttctcgttttattgaagaa
ttgccacaagaatgcttacaagaaattcgattacgaggcaaagtcacacgtgcttataat
caaaatgctgtgggatcgataaaatcaacaccaatgttaaatacttctgaatggaagatg
ggacaaaaagtacagcatgcgaagtttgggaaaggctcaattatcaatgttgaaggtagc
ggcgagcatacgcgtttacaaattgcattccaaggtgaaggcattaaatggctgattgca
aaattggcaaaattagaaaaactgaattaa
DBGET
integrated database retrieval system
