Actinobacillus delphinicola: NCTC12871_00311
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Entry
NCTC12871_00311 CDS
T06572
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
adp
Actinobacillus delphinicola
Pathway
adp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12871_00311 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adp03019
]
NCTC12871_00311 (rhlB)
Enzymes [BR:
adp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12871_00311 (rhlB)
Messenger RNA biogenesis [BR:
adp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12871_00311 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
VEJ08893
UniProt:
A0A448TST4
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All DBs
Position
1:complement(325853..327058)
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AA seq
401 aa
AA seq
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MSDTYLTQQRFSDLPLESSIKQALAQKGFEFCTPIQALTLPLSLAGRDIAGQAQTGTGKT
MAFLIAVFHQLLSKPQKTKQIRSLILAPTRELAVQIHDDAKFLAKATGLRLGLAYGGEGY
DQQLQTLEKGVDILIGTTGRVIDYVKQGVVSLNHIQAVVLDEADRMFDLGFIRDIRYILR
RCPKPQERLTLLFSATLSYKVRELAFEDMNEPEYVEVEPMQKTGHRIQEELFYPSNQDKM
ALLLTLIEEEWPDRAIIFANTKHQCEEVWRYLQADGHRVALLTGDVAQKKRLALLKAFTD
GDLDLLVATDVAARGLHIPDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEKY
AMNLPAIEEYIEHQIPISQYDPTALRTDLPKLTHSYVKRRK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacacttatttaactcaacaacgcttttccgatcttcctttagaaagtagtata
aaacaagcattagcacagaaaggctttgagttttgtacccctattcaagcactaacgtta
ccgcttagtctagcaggacgtgatattgcaggacaggctcaaacagggactggtaaaaca
atggcattcttaattgctgtttttcaccaacttctttccaaacctcaaaaaacgaaacaa
attcgatcactgattttagctcctactcgcgaactcgccgttcaaattcatgatgacgca
aaatttttagcgaaagcaactggcttacgtttaggcttggcttatggtggcgaagggtac
gatcaacaattgcaaacgcttgaaaaaggcgttgatattttaattgggacaacgggacgg
gttattgattacgtgaaacaaggtgtagtttcattaaaccacattcaagccgttgtattg
gatgaagctgatcgcatgtttgacttaggatttatccgtgatatccgttatatcttgcgt
cgctgtcctaaaccgcaggaacgcttaaccttacttttctctgcaactttatcttacaaa
gtacgagaattagcatttgaggatatgaatgaacctgaatatgttgaagtagagccaatg
caaaaaacgggacaccgtattcaagaagaacttttctacccatctaaccaagataaaatg
gcactcctgcttacccttattgaagaagagtggccagatcgtgcaattatttttgctaat
actaaacatcaatgtgaagaagtttggcgttatttacaagccgatggacatcgtgtcgct
ctattaactggcgatgttgcacagaaaaaacgtttagcgctacttaaagcctttacggat
ggtgatcttgatttgttggtggcaaccgatgtcgccgctcgtggattacatatcccagat
gtgactcacgtattcaactacgatctcccagacgatcgagaagattatgttcatcgtatt
ggtcgaacagggcgtgctggtgaaagtggtgtatctattagctttgcttgcgaaaaatac
gcaatgaatttacccgcgatcgaagagtatatcgaacaccaaatcccaattagccaatac
gatccaaccgcattacgtacggatttgccaaaattaactcattcttatgtaaaacgtaga
aaataa
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