Actinobacillus delphinicola: NCTC12871_00461
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Entry
NCTC12871_00461 CDS
T06572
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
adp
Actinobacillus delphinicola
Pathway
adp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12871_00461 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adp03019
]
NCTC12871_00461 (pnp)
03016 Transfer RNA biogenesis [BR:
adp03016
]
NCTC12871_00461 (pnp)
Enzymes [BR:
adp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC12871_00461 (pnp)
Messenger RNA biogenesis [BR:
adp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC12871_00461 (pnp)
Transfer RNA biogenesis [BR:
adp03016
]
Prokaryotic type
tRNA degradation factors
NCTC12871_00461 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
S1_2
KH_SLS1_2
KH-I_KHDC4-BBP
aRib
Motif
Other DBs
NCBI-ProteinID:
VEJ09032
UniProt:
A0A448TSR7
LinkDB
All DBs
Position
1:498980..501118
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AA seq
712 aa
AA seq
DB search
MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTSVLVTVVAKKDVKEGQDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFFNEIQIIATVVSVN
PQVSPDLVAMIGASAALTLSGVPFNGPIGVARVGFINNQFVLNPTINEQKISDLDLVVAG
TEKAVLMVESEAKILSEEQMLAAVVFGHEQQQVVIQAIKEFAQEAGKPRWDWVAPEPNTD
LINKVKALAETRVGDAYRITEKQARYAAIDEIKADVVAQLQAEDETIEENKILDIITELE
SNIVRSRILAGEPRIDGRTKDTVRALDICTGVLPRTHGSALFTRGETQSLAVATLGTERD
AQIIDELTGERNDHFLFHYNFPPFSVGETGMIGSPKRREIGHGRLAKRGVAAVMPSITEF
PYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKGDENFVVLTDI
LGDEDHLGDMDFKVAGTREGVTALQMDIKIEGITPEIMQIALNQAKSARMHILNVMEKAI
PAPREELSEFAPRIYTMKIDPKKIKDVIGKGGATIRSLTEETNTSIDIDDDGTVKIAATD
GNSAKEVMRRIEDIVAEVEAGKIYQGKVTRLADFGAFVSILGNKEGLVHISQIADERVER
VSDYLKVGQEVTVKVVEIDRQGRIRLTMKDIVPAEAVVAEETVVEPSATVEE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgacgccaattgtaaaacaatttaaatatggtcaacatactgtaacgttagaaacaggt
gccattgcacgtcaagcaaccgctgccgttatggcaagtatggatgatacatctgtgctt
gtaactgttgttgctaaaaaagatgtaaaagaaggtcaagacttcttccctcttaccgta
aactatcaagaaaaaacttacgctgcgggtaaaattcctggcggtttctttaaacgtgaa
ggacgcccaagtgaaggcgaaacccttattgcacgtttaatcgatcgtccgattcgccca
ttattcccagaaggtttctttaacgaaatccaaatcattgcaactgtggtttctgtaaat
ccacaagtaagccctgatcttgttgcaatgatcggtgcttcagctgcattaactttatct
ggggtaccattcaatggccctatcggtgtcgctcgtgttggtttcatcaacaaccaattc
gtcttaaacccaacaatcaacgaacaaaaaattagcgatctagatctcgttgttgctggt
acagaaaaagcggtattaatggttgaatctgaagcaaaaattctttcagaagaacaaatg
cttgcagcagttgtatttggtcatgaacaacaacaagttgttatccaagcgatcaaagaa
tttgcccaagaagcaggtaaaccacgttgggattgggtagctccagaaccaaataccgat
ttaattaacaaagttaaagcattagcagaaactcgtgttggtgatgcatatcgtattacc
gaaaaacaagctcgctacgcagcaattgatgaaatcaaagccgatgttgttgcacaatta
caggctgaagatgaaactatcgaagaaaacaaaatccttgatatcatcaccgaattagaa
agtaatattgtacgtagccgaatccttgcaggtgaaccacgtatcgatggtcgtacaaaa
gacactgtgcgtgcattagatatttgtactggcgtattaccacgtactcacggctctgca
ctatttactcgtggtgaaactcaatctttagcagttgcaacactcggtactgaacgtgat
gcacaaatcatcgatgaattaacaggtgaacgtaacgatcacttcttattccactacaac
ttccctccattctctgtaggtgaaactggaatgatcggctcaccaaaacgtcgtgaaatt
ggtcatggtcgtcttgcaaaacgtggtgtggctgcagtgatgccaagcattactgaattc
ccatacaccgtacgtgtagtttcagaaattactgaatctaatggttcatcttctatggca
tctgtatgtggtgcatctctagcattaatggatgcaggtgtaccaattaaagcagctgtt
gctggtatcgcaatgggtcttgtaaaaggcgatgaaaactttgttgtattaaccgacatt
cttggcgatgaagatcaccttggcgatatggacttcaaagtagcaggtactcgtgaaggg
gttacagcattacaaatggatatcaaaattgaaggtatcacccctgaaattatgcaaatc
gcacttaaccaagcgaaaagtgcacgtatgcacatcttaaacgtgatggaaaaagcaatt
cctgcacctcgtgaagaattgtctgaatttgctccacgtatttacaccatgaaaattgat
cctaagaaaatcaaagatgttatcggtaaaggtggcgcaactatccgttctttaactgaa
gaaactaatacttctattgatattgatgacgacggtactgtaaaaattgcagcgactgac
ggtaactcagcgaaagaagtcatgcgtcgtattgaagatatcgttgcagaagttgaagca
ggcaaaatctaccaaggtaaagtgactcgccttgctgattttggggcatttgtttcaatc
cttggcaacaaagaaggtcttgttcatatttcacaaatcgctgatgaacgtgtagaacgt
gtaagtgactacttaaaagtcggtcaagaagtaactgtaaaagttgtagaaattgatcgt
caaggtcgtatccgcttaacaatgaaagatattgtacctgctgaagcagtagtagcagaa
gaaaccgttgttgaaccatcagcaacagttgaagaataa
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