Actinobacillus delphinicola: NCTC12871_00462
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Entry
NCTC12871_00462 CDS
T06572
Symbol
deaD
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
adp
Actinobacillus delphinicola
Pathway
adp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12871_00462 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adp03019
]
NCTC12871_00462 (deaD)
03009 Ribosome biogenesis [BR:
adp03009
]
NCTC12871_00462 (deaD)
Enzymes [BR:
adp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC12871_00462 (deaD)
Messenger RNA biogenesis [BR:
adp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12871_00462 (deaD)
Ribosome biogenesis [BR:
adp03009
]
Prokaryotic type
rRNA helicases
NCTC12871_00462 (deaD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
VEJ09033
UniProt:
A0A448TT80
LinkDB
All DBs
Position
1:501282..503084
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AA seq
600 aa
AA seq
DB search
MTEQQLTFNDLGLPEYLLNAVADMGFTQPSPIQEKCIPALLAGQDVLGMAQTGSGKTAAF
SLPLLAHLDSNQKYPQMLVMAPTRELAIQVADACEQFTKHAKGLRVVTLYGGQRYDIQLR
ALRQGAQIVVGTPGRILDHLRRNTLDLSHLKSIVLDEADEMLRMGFIDDVETVMAELPED
HQTALFSATMPEPIRRITKRFMREPQEIKIKASKTTAPDITQSCWYVRGFRKNEALLRFL
EVEDFDAAIIFTRTKSGTMDITALLERNGFRAAALNGDMTQQAREQTLDRLRNGSLDILV
ATDVAARGLDVERISLVVNYDIPLDAESYVHRIGRTGRAGRAGRAILFVEPRENRLLKNI
ERLMNKPIEEVGVPNHEVLQASRRKKFVEKVTKQLEHHDLAEYRSLLEDLFTADQDQEDI
AAAMLMLLQGKQKLILPPDPVIEPRRERGDRNRGDRRDRSDRENPRSRERRGYGTPMAMD
LYRIEVGRADGVDVRHIVGAIANEGDISSRNIGHIKLYDDYATVELPQGMPKALLKHFNK
ARVLNKPMQMSFLNEVKAQSNDRGGKERGRKNFGDSRRERGDRERKFSEKKRSFKERGRR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaattaacttttaatgatttaggcttgccagaatacctactgaatgcc
gttgcagacatgggctttactcaaccttcccctatccaagaaaaatgtatccctgcacta
ttagcaggacaagatgtgttaggtatggcacaaacaggaagtggtaaaacagctgcattt
tctttaccgttacttgctcatttagatagtaatcaaaaatatccacaaatgctcgtaatg
gcaccaacccgtgaacttgctattcaagtagcggacgcttgtgaacaatttactaaacac
gcaaaaggtttacgtgttgtcactttatacggtggtcaacgctatgacatccaattgcgc
gcacttcgccaaggtgcacaaattgttgtgggaacacctggacgtattcttgaccattta
cgtcgcaataccctagatctctcacatctaaaatctatcgttttagatgaggcagatgaa
atgttacgtatgggtttcattgacgatgttgaaaccgtgatggcagagttaccagaagat
caccaaacagccctcttctctgccacaatgccagaaccgattcgccgcattacgaaacgt
tttatgcgtgaaccacaagaaattaaaattaaagcaagtaaaacaaccgcaccagatatt
acacaaagttgctggtacgtgcgtggtttccgtaagaatgaagcacttttacgttttctt
gaagtagaagactttgacgcagcgatcatttttacacgcaccaaatctggcacaatggat
atcactgcattacttgaacgtaatggtttccgtgcggctgctttaaatggtgatatgacc
caacaagcacgtgaacaaacccttgatcgcttacgtaatggtagccttgatattttagtt
gcaaccgatgttgcagcccgcggtcttgacgtggaacgcattagccttgttgtaaactat
gacattccacttgatgccgaaagctacgtacaccgtatcggacgtacagggcgtgcagga
cgtgcagggcgtgcaattttattcgtagaacctcgtgaaaaccgcttattgaaaaacatt
gagcgcttgatgaataaacctatcgaagaagtaggtgtaccaaatcacgaagtgctacaa
gcaagtcgccgtaaaaaattcgttgaaaaagtaacaaaacaacttgaacatcacgatctt
gctgaataccgcagtttacttgaagatctcttcactgcagatcaagatcaagaagatatt
gcagcagcgatgttaatgctactacaaggaaaacaaaaactgatccttccaccagatcct
gtaatcgaacctcgccgtgaacgtggtgatcgcaaccgtggagatcgtcgtgatcgtagc
gatcgtgaaaatcctcgctctcgtgaacgtcgtggttatggcacaccaatggcaatggat
ctttaccgtattgaagtaggtcgtgcagatggtgtcgatgttcgccatattgttggtgca
atcgcaaatgaaggtgacatcagtagccgtaatatcggtcatattaagctttatgatgac
tacgcaaccgttgaattaccacaaggtatgccaaaagcattattgaaacatttcaataaa
gcccgtgtgttaaataaaccaatgcaaatgtcattcctaaatgaagtaaaagctcaaagc
aacgatcgtggtggtaaagagcgtggtcgcaaaaactttggtgattcacgtagagagcgt
ggcgatcgtgagagaaaatttagcgagaaaaaacgttcattcaaagaacgtggtcgccgt
taa
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