Actinobacillus delphinicola: NCTC12871_00595
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Entry
NCTC12871_00595 CDS
T06572
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
adp
Actinobacillus delphinicola
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
adp03016
]
NCTC12871_00595 (truB)
Enzymes [BR:
adp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC12871_00595 (truB)
Transfer RNA biogenesis [BR:
adp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC12871_00595 (truB)
Prokaryotic type
NCTC12871_00595 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
VEJ09159
UniProt:
A0A448TT42
LinkDB
All DBs
Position
1:complement(643773..644690)
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AA seq
305 aa
AA seq
DB search
MARKKKGRDIHGVFLLDKDQGMSSNGIMQRVKRLFNANKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDADKRYVVTAKLGERTDSSDADGQVVETRPITCSLGDILDALNDFRGDILQ
VPTMFSALKYQGKPLYEYARQGITVEREARPITIFELKFIEWQAPYLTLEVHCSKGTYIR
TLVDDLGEKLGCGAHVTMLRRLAVADFPAEKMMKLADLEALAEQSGDDFSQLDALLLPMD
SSVSRLPRLDLTSEQAEGVRFGRRVRFDNHTSLGGQVRIFDEHERFMGIAEIDGHLIRPQ
RLVVY
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaagaaaaaagggcgtgatatccacggtgttttcctcttagacaaagatcaa
ggcatgagttcaaatggcattatgcaacgtgttaaacgtttatttaatgccaataaagca
gggcatacgggagcgttagatccgcttgcaacaggcatgctccctatttgcctaggtgaa
gcaaccaaattttcacaatttttattggatgcggataaacgctacgttgttacggcaaaa
ttaggggaacgtacggatagttctgatgccgatggacaagttgttgaaactcgcccaatt
acttgtagtctgggtgatattcttgatgcattgaatgattttcgtggcgatattcttcaa
gttccaacaatgttttccgcattgaaatatcaaggaaaaccgctttacgaatatgctcgc
caaggaattacagttgaacgtgaagctcgtcctattacaatttttgagcttaaatttatt
gaatggcaagccccttacttgaccctagaagttcattgttctaaagggacttatattcgt
acgcttgttgatgatttaggtgagaaattaggttgtggtgcgcatgttaccatgttacgc
cgtcttgcagttgctgatttccccgcagaaaaaatgatgaaattggcggatcttgaggca
ttagcagaacaaagtggtgatgattttagtcaactagatgcacttctactgccaatggat
agtagcgtatctcggttgcctcgtttagatttgacctcagaacaagcagaaggagtgcgt
tttggacgtcgagttcgttttgacaatcatacttctctaggtggacaagtcagaattttt
gatgaacatgagcgttttatggggattgctgaaattgatgggcatcttattcgtcctcag
cgattagtcgtttattag
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