Actinobacillus delphinicola: NCTC12871_00783
Help
Entry
NCTC12871_00783 CDS
T06572
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
adp
Actinobacillus delphinicola
Pathway
adp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC12871_00783 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adp03021
]
NCTC12871_00783 (rpoC)
03400 DNA repair and recombination proteins [BR:
adp03400
]
NCTC12871_00783 (rpoC)
Enzymes [BR:
adp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC12871_00783 (rpoC)
Transcription machinery [BR:
adp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC12871_00783 (rpoC)
DNA repair and recombination proteins [BR:
adp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC12871_00783 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
VEJ09334
UniProt:
A0A448TTJ8
LinkDB
All DBs
Position
1:828802..833046
Genome browser
AA seq
1414 aa
AA seq
DB search
MKDLAKLLKTQSKTSEDFDVIKIGLASPDMIRSWSYGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQSKVRRERMGHIELASPVAHIWFLKS
LPSRIGLLLDMPLRDIERVLYFESFIVTEPGMTDLEKGQLLTEEQYLEAEERFGDEFEAK
MGAEAIQDLLRAMDLEHECEVLREELQETNSETKRKKITKRLKLIESFIQSGNKPEWMVL
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLIAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNRRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
FLRLHQCGLPKKMALELFRPFIYAKLESRGYATTIKAAKKMVEREDAIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTREKVNAKGEGMVLQDPREAEKAYAT
GKAELHARVKVRITEWVKNVAGEYEPHTHLVDTTVGRAILWMIAPKGMPFSLFNQPLNKK
GISRLINSSYRLLGLKESVMFADHIMYTGFAYAARSGSSVGVDDMVIPAKKYEIIAEAEA
EVAEIQEQFQSGLVTAGERYNKVIDIWSTANERVGKAMMENLSTEEVMNREGKLEKQASF
NSIFMMADSGARGSATQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIIEDDCGTHEGIVMMPLIEGGDVKEALRDRV
LGRVVAEDVLKPGTDEVLIPRNTLVDEKLCDVIDANSVDSIKVRSVVTCETDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSVQVKNTGTLR
LTGAKFVTNKEGKLVLTSRNTELTVVDTFGRTKEHYKLPYGAILSKGDAAEVEAGEIVAN
WDPHTMPVISEVSGFVKFEDIVDGLTVTRQTDELTGLSSIVVQDVGERTTAGKDLRPAIK
LVDAQGNDIFIPGTEVVAQYFLPGKAIVNLDDGAEISIGESLARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLLITPAEGETYEEMIPKWRQLNVFE
GEMVEKGDLISDGPEMPHDILRLRGVHAVTEYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKCVITNAYDSEFLEGAQEEVARVKIVNRQRIAEGKPPVEFQRELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGFAYHKNKRLDREAVNAEI
DAAIMENPVVEEAEIISPADEATADLAKMLNMAD
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagcaaagcttttaaaaacacaatcaaaaactagcgaagattttgatgtg
attaaaattggtttagcgtcaccagatatgatccgttcttggtcatacggtgaagtgaaa
aaacctgaaaccattaactaccgtactttcaaaccagaacgtgatggtcttttctgtgcc
cgtatcttcggacctgtaaaagattacgaatgtttatgtggtaaatataaacgtttaaaa
caccgtggcgtaatctgtgaaaaatgtggtgttgaagtaactcaatctaaagtacgtcgt
gaacgtatggggcatattgaacttgcttctccagtagcacacatttggtttttaaaatct
ctaccatctcgtatcggtttattacttgatatgccattacgtgatattgaacgtgtttta
tattttgaatctttcattgtcactgaacctggcatgactgacttagaaaaaggtcagctt
cttactgaagaacaatatcttgaagcagaagaacgttttggcgacgaattcgaagcgaaa
atgggtgcggaagcaatccaagatttgttacgtgcgatggatttagagcatgaatgtgaa
gttttacgtgaagaattacaagaaactaactcagaaactaaacgtaaaaaaatcactaaa
cgcttaaaacttattgaatctttcattcaatctggcaacaaaccagaatggatggtatta
actgtacttccagtattaccaccagatcttcgcccattagtaccacttgatggtggtcgt
tttgcgacatctgacttgaatgatttatatcgccgcgtaattaaccgtaataaccgttta
aaacgtttattagaccttatcgcaccagatatcatcgtacgtaatgaaaaacgtatgtta
caagaatctgtagatgcgttattagataatggtcgtcgtggtcgtgcgatcactggctct
aaccgccgtccattaaaatctttggctgatatgatcaaaggtaaacaaggtcgtttccgt
caaaacttattaggtaaacgtgttgactactctggtcgttctgtaattacagtaggtcca
ttcttacgtcttcaccaatgtggtttaccgaaaaaaatggcattggaattattccgtcca
ttcatctatgcgaaattagaaagccgtggctacgcaactacaattaaagctgcgaagaaa
atggttgaacgtgaagatgcaatcgtatgggatatcttagcggaagttattcgcgaacat
ccaatcctccttaaccgtgcgccgacacttcaccgtcttggtattcaagcatttgaacca
attctaattgaaggtaaagcaatccgtttacacccactcgtttgtgcggcattcaatgcg
gacttcgatggtgaccaaatggcggttcacgtacctttaacattagaagcacaacttgaa
gcacgtgcgttaatgatgtctacaaacaacatcttatcgcctgcgaatggtgagccaatc
atcgttccttcacaagacgtggtattaggtctttactacatgacccgtgaaaaagtgaat
gcgaaaggtgaaggcatggtattgcaagatcctcgtgaagcagaaaaagcttacgcaaca
ggtaaagcagaattacacgcacgcgttaaagtacgtattactgaatgggtgaaaaatgtt
gcaggtgagtatgaacctcatacacaccttgtagatacgactgttggtcgtgcaatcctt
tggatgatcgcaccaaaaggtatgccattcagcttgtttaaccaaccgttaaacaaaaaa
ggtatttctcgcttaattaacagcagctaccgtctacttggcttaaaagaaagtgtaatg
tttgctgaccatatcatgtataccggttttgcatacgcagcacgttctggttcttctgtt
ggtgttgacgatatggttatcccagcgaagaaatatgaaattattgcagaagcagaagca
gaagttgctgaaattcaagaacaattccaatcaggtcttgtaacagcaggcgaacgctat
aataaagtaatcgatatttggtctactgcgaatgagcgcgtaggtaaagcgatgatggaa
aacctttctacggaagaagtaatgaaccgtgaaggtaaacttgaaaaacaagcatcattc
aacagcatctttatgatggcagactcaggggctcgtggtagtgcgactcagattcgtcag
cttgctggtatgcgtggtttgatggctcgtccagatggttcgatcatcgaaactccgatt
acagcgaacttccgtgaaggtctaaacgtattacagtactttatttcaacccacggtgcg
cgtaaaggtttggcggatacagcgttaaaaacagcgaactcaggttacttaactcgtcgt
ttagtagacgtagcacaagacttagttatcattgaagatgactgtggtacccacgaaggt
atcgtaatgatgccattaatcgaaggtggtgacgttaaagaagcattacgtgatcgtgtt
ctcggtcgtgtggttgcagaagacgtattaaaaccaggtacagacgaagtattaattcca
cgtaatacacttgtggatgaaaaactttgtgatgttatcgatgcaaactctgtagatagt
atcaaagtacgttctgttgtaacgtgtgaaactgacttcggtgtatgtgcgaaatgttac
ggtcgtgacttagcacgtggtcacttaattaaccaaggtgaagcggttggtgttatcgca
gcacaatcaatcggtgaaccaggtacacagttaaccatgcgtacgttccacatcggtggt
gcggcatctgcagcagcaaaagaatctagcgtacaagttaaaaataccggtactttacgt
ctaactggtgcgaaattcgtaaccaataaagaaggtaaactcgttcttacctcacgtaat
acagaattaaccgtagttgatacttttggtcgtacaaaagaacactataaacttccatac
ggtgctatcttaagtaaaggtgacgctgcggaagttgaagcaggtgaaatcgtagcaaac
tgggatccgcatacaatgccggttatctctgaagtgagcggtttcgtgaaatttgaagac
atcgtggatggtttaactgtaactcgtcaaactgatgaattaacaggtttatcttctatc
gttgttcaagatgtcggtgaacgtacaactgcaggtaaagatttacgtccagcaattaaa
cttgttgacgctcaaggtaatgatatctttatcccaggtacggaagttgttgcacaatac
ttcttaccaggtaaagcaatcgtgaacttagacgatggtgcagaaatttcaatcggtgaa
tctttagcacgtattccacaagaatctgtgggtactaaagatattaccgggggtcttcca
cgcgttgctgacttatttgaagctcgtaaaccgaaagaacctgcaattcttgctgaaatc
tctggtatcgtatcatttggtaaagaaaccaaaggcaaacgtcgtttattgattacacca
gcagaaggtgaaacttacgaagaaatgattccgaaatggcgtcaattgaacgtatttgaa
ggtgaaatggtagaaaaaggtgacttaatctctgatggtcctgaaatgccacacgatatt
cttcgcttacgtggtgttcacgctgtgacagaatatatcgttaatgaagtacaagaagtt
taccgcttacaaggggtaaaaattaacgataaacacatcgaagtaatcgttcgccaaatg
ttacgtaaatgtgtgatcactaacgcatacgattctgaattccttgaaggtgcacaagaa
gaagttgcgcgcgttaaaattgttaaccgtcaacgtattgcagaaggtaaaccaccagtt
gaattccaacgtgaattacttggtattaccaaagcatcacttgcgacagaatcctttatt
tctgcagcatcattccaagaaaccactcgcgttcttacagaagcagcggttgcgggtaaa
cgtgatgaattacgcggtcttaaagaaaacgttatcgtgggtcgtttaattccagcaggt
actggttttgcgtatcacaaaaataaacgtttagatcgtgaagcagtgaatgcagaaatc
gatgcagctatcatggaaaatccagtggtagaagaagctgaaattatcagccctgcggat
gaagcaactgcggatctcgcaaaaatgctaaacatggcagactaa
DBGET
integrated database retrieval system
