Actinobacillus delphinicola: NCTC12871_00920
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Entry
NCTC12871_00920 CDS
T06572
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
adp
Actinobacillus delphinicola
Pathway
adp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12871_00920 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adp03019
]
NCTC12871_00920 (recQ)
03400 DNA repair and recombination proteins [BR:
adp03400
]
NCTC12871_00920 (recQ)
Enzymes [BR:
adp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12871_00920 (recQ)
Messenger RNA biogenesis [BR:
adp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC12871_00920 (recQ)
DNA repair and recombination proteins [BR:
adp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC12871_00920 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HEM4
Hanta_Gn-B
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
VEJ09459
UniProt:
A0A448TTX4
LinkDB
All DBs
Position
1:complement(967805..969679)
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AA seq
624 aa
AA seq
DB search
MEAQHANVTENVDIALNILKSTFGYQHFRTGQQEVIQATLAKRDSLVIMATGNGKSLCYQ
IPALYFKGLTLVISPLISLMKDQVDQLRANGIAADFLNSSQTFEEQQRVQSRAIQGELKL
LYLSPEKILSHSFFQFISQCHVSFIAIDEAHCISQWGHDFRPEYTQLGNLKQAFPNIPIM
ALTATADLVTRQDIVKHLNLQEPYRYIGSFDRPNIRYMVMEKFKPTDQLCTFVQKQKGKS
GIIYCNSRKKVEKLTERLQKEGIQVAGYHAGMETAERERIQQAFQRDDIQVIVATIAFGM
GINKSNVRFVVHFDLPRSIESYYQETGRAGRDNLPAQAVLFYDPADYAWLEKILLEKADS
PQRQIEQQKLQSIGEFADSQTCRRLVLLNYFGEHRHEACQNCDICLDPPKKYDGLLDAQK
IMSTIFRVGQSFGSHYVIAVLRGMKNQKIIDNQHDTLSVYGIGKEKSQEYWQSVLRQLIH
LGFVKQVMLETNYIPHSQLMLTSEARAVLRSEIPLQLAEPRLPRHMSAISHKNIVTNYDK
DLFARLRFLRKQIADKNNIPPYIVFNDATLQEMARYKPDSSKAMLEINGVGSIKMERFGY
AFLTIIKEHIQNQNKGTDYELSRN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcacaacacgcaaacgttacagaaaatgttgatatcgcacttaatattttaaaa
tcaacctttggttatcagcattttcgtacgggacagcaagaagttattcaagcaacgtta
gcaaaacgcgattccctcgtcattatggcgacagggaatggtaagtcgctttgctaccag
attccagcgctttattttaaagggctaacacttgtcatttctccgcttatttcattaatg
aaagaccaagtggatcaactacgtgcaaatggtattgctgcggactttctcaattctagt
cagacttttgaagaacagcaacgtgttcagagtcgagccattcagggtgagttaaaattg
ctctatctctcgcctgaaaaaattctttcacatagtttctttcaatttatttcacaatgc
cacgtcagttttattgccattgatgaggcacactgtatttctcaatggggacacgatttt
cgtcctgaatacacacaacttggcaatttgaaacaagcctttccgaatattcctatcatg
gcacttacagcaacagccgatcttgtaacacgccaagatattgtaaaacatttaaactta
caagaaccctatcgttatattggtagttttgaccgtcccaatattcgttatatggttatg
gaaaaatttaagcctactgatcaactttgtacctttgtgcaaaaacagaaagggaaaagt
gggattatttattgtaatagccgtaaaaaagtagaaaaattaactgagcgtcttcaaaaa
gaaggtattcaagttgcaggctaccatgctggaatggagacagcagaaagagaacgtatc
caacaagcatttcaacgtgatgatattcaagtaatcgttgctaccattgcttttggaatg
ggaataaacaaatccaacgtccgctttgttgtccattttgaccttcctcgtagtattgaa
tcctactaccaagaaactggacgcgcgggtcgagataaccttccagcacaagctgtcctt
ttttatgatccagcagattatgcgtggctggaaaagattcttttagagaaagcagatagt
ccacaacgccaaatcgaacaacaaaaattacaaagtattggcgaatttgccgatagccaa
acctgccgaagactagtcctactcaattactttggagaacatcgccacgaggcatgccaa
aactgcgatatctgcctcgatcctcctaaaaaatacgatggacttttggatgctcaaaag
attatgtcaactattttccgcgtaggacaatctttcggtagccactatgtcatcgccgta
ctccgtggcatgaaaaaccaaaaaattattgataatcaacatgatactttaagtgtttat
ggcatcggcaaagaaaaatctcaagaatactggcaatcagtattacgccaacttattcat
ctcggttttgtcaaacaagtaatgttagaaacaaattatatcccacatagtcaacttatg
cttacttcggaagcacgagcagtgttacgtagtgagattccactacaacttgcagaacca
agattgccacgccatatgagtgcaatatcacataaaaatattgttacgaattacgacaaa
gacttatttgcaagactgcgtttcttacgtaaacaaattgcagataaaaataatattccg
ccttatatcgtatttaacgatgctactttacaagaaatggcacgctataagcctgattct
agtaaagctatgctagaaataaatggtgtaggctcgataaaaatggagcgttttggatac
gcatttttaactataattaaagagcatattcaaaatcaaaataaaggaaccgattatgaa
ctttcaagaaattag
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