Actinobacillus delphinicola: NCTC12871_00993
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Entry
NCTC12871_00993 CDS
T06572
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
adp
Actinobacillus delphinicola
Pathway
adp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC12871_00993 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adp03021
]
NCTC12871_00993 (rpoA)
03400 DNA repair and recombination proteins [BR:
adp03400
]
NCTC12871_00993 (rpoA)
Enzymes [BR:
adp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC12871_00993 (rpoA)
Transcription machinery [BR:
adp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC12871_00993 (rpoA)
DNA repair and recombination proteins [BR:
adp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC12871_00993 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
VEJ09530
UniProt:
A0A448TU65
LinkDB
All DBs
Position
1:1031489..1032481
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AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPHLVDIEQMSSTQAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEVLLNLKGLAIKLQNNKDDVFLTLNKSGIGPVVAADIAKDN
DVEIANPDHVICHLTDENASINMRIRVQRGRGYVPASSRVHSQDEDRPIGRLLVDACYSP
VERIAYDVEAARVEQRTDLDKLVIELETNGTIEPEEAIRRAATILAEQLEAFVDLRDVRQ
PEVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPQGLSED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaaaccacatttagttgatattgaacaaatgagt
tcaactcaagctaaagtgaccttagaaccgttagaacgaggatttggtcatacgctaggt
aatgcattacgtcgaattttattatcttcaatgccaggttgtgctgtaactgaagtagaa
attgatggtgtattgcatgagtacagtagtaaagaaggtgttcaagaagatattattgaa
gtgcttctaaacttaaaaggtctagcgattaagttgcagaataataaagacgatgttttt
cttacgttaaacaagtctggaatcggccctgttgttgctgcggatattgctaaagacaat
gatgttgagattgctaatccagatcacgttatttgtcatttaactgatgaaaatgcatca
attaatatgcgtattcgtgttcaacgaggccgtggttatgtaccagcatctagccgtgta
catagtcaagacgaagatcgaccaatcggtcgtctacttgttgacgcatgttatagtcca
gttgaacgtattgcttacgatgttgaagcggcacgtgttgagcaacgtactgatttagat
aaattagttattgagcttgaaacaaatggtactattgaaccagaagaagctattcgtcgc
gctgcaacaattttagcagaacaacttgaagcgttcgttgatttacgtgatgttcgtcaa
ccagaagttaaagaagaaaaaccagaatttgatcctattctgctacgacctgttgatgat
ttagaattgacagttcgttctgctaactgtttgaaagcagaaacaattcattatatcggt
gatcttgtacaacgtacagaagttgaattattaaaaacgcctaatcttggtaagaaatct
cttactgaaattaaggacgtattggcttctcgtggtttatcacttggtatgcgtcttgaa
aattggccacctcaaggtttgtctgaagactaa
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