Actinobacillus delphinicola: NCTC12871_01044
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Entry
NCTC12871_01044 CDS
T06572
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
adp
Actinobacillus delphinicola
Pathway
adp03030
DNA replication
adp03430
Mismatch repair
adp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12871_01044 (holA)
03430 Mismatch repair
NCTC12871_01044 (holA)
03440 Homologous recombination
NCTC12871_01044 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adp03032
]
NCTC12871_01044 (holA)
03400 DNA repair and recombination proteins [BR:
adp03400
]
NCTC12871_01044 (holA)
Enzymes [BR:
adp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12871_01044 (holA)
DNA replication proteins [BR:
adp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12871_01044 (holA)
DNA repair and recombination proteins [BR:
adp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12871_01044 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
VEJ09572
UniProt:
A0A448TU94
LinkDB
All DBs
Position
1:1087680..1088720
Genome browser
AA seq
346 aa
AA seq
DB search
MRRIASDQLSFALQKGLPPVCILTGSDPLLLIEAEDMLCQYASEQGFDEKYRQTIENTTD
WDSILERVQSMGLFFQRQIIYLQLPENLNAAIQNQLQVLIEHLNEDCLLILHLPKFNKNV
EKQKWVVALEKFAPQSWLVNCQTPTLEALPQWISIRARQLELAFDQESIQLLCYNYEGNL
LALKQVLSLLSLLYPASKITLPRVQQVIEQSAVFSVYQWVDALLSGDALRAKQILSALQQ
DDTQPVILLRSLQREIMMLLQITQPYSTFNMDMPLDLSGARARFDELRIWQNRRNLLLQA
AKRFTYRRIFEIIQELAVLERAVKQDFNQNVWQELTLLSYHFCQPN
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaattgcaagcgatcaactcagctttgcattacagaaaggattaccgccagta
tgtattttgactggtagtgatcctttattgctgattgaagctgaagatatgctttgccag
tatgcctctgaacagggattcgatgaaaaatatcgtcaaacgattgagaatacgacagat
tgggacagtattcttgagcgcgttcaatctatggggctattttttcagcggcaaattatt
tatttgcaattacccgaaaatcttaatgcggcaatacaaaatcaattacaggtattgatt
gagcacctaaatgaagattgtttgttaattttacatttaccaaaatttaataaaaatgta
gaaaagcaaaagtgggtagtcgccttagaaaaatttgctccacaaagttggttggtaaat
tgccaaacaccaacattagaggcactcccacagtggattagtattcgggcacgtcaatta
gaattagccttcgatcaagaaagtatccaattgctgtgttataactatgaaggaaactta
ctggcattaaagcaagtattatcgcttttaagtttactttatcctgcgagtaaaattaca
ttaccacgggttcagcaagtgatagagcagtctgccgtatttagtgtttatcagtgggta
gatgcgttactttcaggagatgctcttcgcgcaaaacagattttatctgcattacaacaa
gatgatacgcaacctgtcattctgttaagaagtttgcaacgtgagatcatgatgcttttg
caaatcacgcagccttattctacgttcaatatggatatgccacttgatttaagtggtgca
cgggctcgttttgatgaattacgtatttggcaaaatagacggaatttattgcttcaagca
gcaaagcgttttacatatcgtagaatttttgaaattattcaagaacttgctgtcttagaa
cgtgccgtgaaacaagactttaatcaaaatgtatggcaagaattaactttactaagttac
catttttgccagcctaattag
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