Actinobacillus delphinicola: NCTC12871_01656
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Entry
NCTC12871_01656 CDS
T06572
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
adp
Actinobacillus delphinicola
Pathway
adp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12871_01656 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adp03400
]
NCTC12871_01656 (recB)
Enzymes [BR:
adp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC12871_01656 (recB)
DNA repair and recombination proteins [BR:
adp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12871_01656 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VEJ10146
UniProt:
A0A448TW20
LinkDB
All DBs
Position
1:1732340..1736098
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AA seq
1252 aa
AA seq
DB search
MTAKTIQPLNPITLPLNKTSLIEASAGTGKTHTIASLYLRLLLQVGENAFAIPLRVDQIL
VVTFTKMATEELKGRIRERIHEAKLAFEAVRAAGDCEQFKDNPFLYDLIQAVFKTSNLDI
AITQLSLAEQDFDLAAIFTIHSFCQRMLRRYAFNSGLPFEIQLLEEGDELNLKTRFADEV
WRESFYPQSLEVTKFIAKNGVSPDALLDRLRNLIGKDIAINLSQKDMLTSSTLSDFLQEQ
AILQADFAKIQTNFKAQWLAHCAALESLFDENSANIARYATKGVSNYLGYFNDMKTWASQ
SDFALAPDRLSKYFTQSALENNLKKGINPFTHPLLTLAEDYAQAEAEFAQKYAESIKLFA
YYFSKEVTHKLRDYKENHTEKSYDDLLWLMEKALRGEQSEQFAQVIRHQYPFAMIDEFQD
TDPQQYFIFNEIYLKAHQDSAPSGFLMIGDPKQSIYKFRGADIFSYLKAAQDAENQFTLD
QNWRSNAGLIESVNTLFSMKNDTSPFLYNDIRFSAVTAAKSKLNFVLNGGKEPPMRIYLQ
DIEDITGKSSKIVKLNEEDFAETCALSIRQWLESAKENQATLDGETLQAKDIAVLLRDAK
QAKLIKDALAKQGINSVYLSDKSNIFQTDIARDMLFVLQACLNPLNEKNILNVLSCALFS
LSMGDIDRIKQQESEWEATVQRFLQYQRIWQHQGVLAMLHQLLQQEQLMTRLFLLQGGER
RLTDYLHLAELLQQASVLNESEAALLHWFEKQVCGDNKLSTAEIRLESDRALVKIVTIHK
SKGLAYDLVWLPFIGFSSRKNGDNIPTYYDKEKGKVLWDMAGEHDDEILQETLAEEMRLL
YVALTRAKYQVVMALPTYFGKNNAQRLAWNGLWNALTPDVLTDKNEPIKTQTLLENWRNL
AGGENIVIEEATALPHFETPLTAETAHLQLDVAKFQGKISRDWSVSSFTKMKYQHLFKQY
AQKQNAIQYFVADRDYDEEESQFNPMTLLDDDTTTQITTCPDYPEGYSPFQFPAGNRVGT
ALHHFLEKLDFQIRLDTNQLEHRQMLLNLAQQMGMPLENDEQAELTIIGLGLWINAILET
PFMEGNPLAFKDIALNERLNELEFFFSVPERFNPTQFNQILAEHHHLPSEPLILESFKGM
MHGFIDLVFVHEGKYYLVDYKSNMLGTSQNAYNQTNIRQKMLNEHYDWQYLIYVVALNRY
LRSRLPDYDYERDFGGVIYPFLRGMTGQAGEGIYFDKPTKTLVDTLEALFAC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaaaaccatccagcctttaaatccgattaccttacctttgaataaaaccagt
ctaattgaagcctcagcagggacggggaaaacgcataccatcgcctcgctttatttacgc
ttattacttcaagtcggcgaaaatgcctttgcaatcccattgcgtgtcgatcaaatcttg
gtagtaacttttactaaaatggcgacagaggaattaaaagggcgtattcgggaacgtatc
catgaggcaaaacttgcctttgaagcagtgagagcggcaggggattgcgaacaatttaaa
gataatccatttttatacgatttaattcaggcagtgtttaaaacgtcaaatctggatatt
gcgattacgcaactttctctcgccgagcaagattttgaccttgcagcaatttttacgatt
catagtttttgtcagcgtatgttaagacgttatgcgtttaattcaggtttgccttttgag
atccaattattagaagagggcgatgaattaaatttaaaaactcgctttgcggatgaagtg
tggcgtgagagtttttacccgcaatctttagaagtgacgaaatttattgctaaaaatggc
gtttcacctgacgcacttctcgatcgtttacgtaatttaatcggtaaggatattgcgata
aatctttcacaaaaagatatgttaaccagctcaactttatctgattttttacaagaacaa
gccattttgcaggcagattttgccaaaattcaaacgaattttaaggcgcagtggttggca
cattgcgctgctttagaaagtctttttgatgaaaatagtgcaaatattgccagatatgcg
acaaaaggcgtgtctaattatcttggctactttaacgatatgaaaacatgggcaagtcaa
tctgattttgccttagcacctgatagactttcaaaatattttacgcagtcggcacttgag
aacaaccttaaaaaaggcataaatccatttacccacccgttgctcacccttgcggaagat
tatgcgcaagcggaggcggaatttgcgcagaaatatgcagaaagcataaaacttttcgct
tactatttttctaaagaagtgactcataaactgcgtgactataaagaaaaccataccgag
aaatcgtatgacgatttgttatggttaatggaaaaagcattgcgtggtgagcaaagtgag
caatttgcacaagttattcgccatcaatatccctttgcaatgattgatgaattccaagat
accgacccgcaacaatattttatttttaacgaaatttacctaaaagcgcatcaagatagc
gctccaagcggatttctgatgatcggcgatccaaaacaatcaatttataaattccgtggt
gcggatattttttcttatctaaaagccgcacaagatgcagaaaatcaatttacgcttgat
caaaactggcgctcaaatgcggggttaattgagagtgtaaatacattattctcaatgaaa
aacgatacctcgccattcctttataacgatatccgtttttctgctgtcacggcggcaaaa
tcgaaattaaattttgtgctaaatggcggaaaagaaccgccaatgcgtatttatctacaa
gatattgaggatatcacgggtaagagttctaaaattgtcaaattaaatgaggaagatttt
gccgaaacctgcgcattatctattcgtcaatggctagaaagtgcgaaagagaatcaagcc
accttagatggagaaacgctacaagcgaaagatattgcggttttattacgtgatgcaaaa
caagcgaaattaattaaagatgctttagccaaacaggggattaattccgtttatctttct
gataagtctaatatattccaaaccgatattgctcgtgacatgctttttgttctacaagcg
tgtttaaacccacttaatgaaaaaaacattctcaatgtactaagttgtgcgcttttttca
ctttcaatgggcgatattgacaggattaaacaacaagaaagcgaatgggaagcgacggtt
caacgttttttacaatatcaacgcatctggcaacatcaaggcgtgttggcaatgttacac
cagcttttacaacaagaacaattaatgacacgattattcttattacaaggcggtgaacgt
aggctaacggattatttacatcttgctgaattacttcaacaagcaagtgtgctaaatgaa
agcgaagcagccttacttcattggtttgaaaaacaagtttgtggtgacaataaactttcc
actgcagaaatccgtttagaaagtgatagggcgcttgttaaaattgtcacgatccataaa
tcaaaaggattggcgtatgatctggtttggttaccatttatcggtttttcaagtcgtaag
aatggcgataacattccaacctattacgataaagagaaaggcaaagtcctttgggatatg
gcaggggaacatgatgatgaaattctgcaagaaaccttagctgaagaaatgcgcctactt
tacgttgctttaacccgtgctaaatatcaagtcgttatggcattacccacttactttggg
aaaaataatgcgcaacgtttagcttggaatggactttggaatgcccttacgccagatgtt
ctgaccgataaaaacgaaccgattaaaacgcaaactttattagaaaattggcgcaatctt
gctggtggtgagaatattgtgattgaagaggcaacggctttaccgcattttgaaacacca
ttaaccgccgaaactgcgcatttacaacttgatgttgcaaaatttcaaggaaaaattagc
cgtgattggtcggtatccagttttaccaaaatgaaatatcaacatcttttcaaacaatac
gctcaaaagcaaaatgctattcaatattttgtggcagatcgcgattatgatgaagaagaa
agtcaatttaatccaatgactttacttgatgacgatacaacaacgcaaattaccacttgc
ccagattatccagaaggctattcacctttccaatttccagcaggcaatcgtgtagggacg
gcattacaccattttttagaaaaacttgattttcaaattcgcttagatacaaatcagctc
gaacatcgccaaatgcttttgaacttagcgcaacaaatgggtatgcctcttgaaaatgac
gaacaagcagaattaacaatcattgggctaggtctatggattaatgccattttggaaacg
ccatttatggaaggcaatccgcttgcgtttaaagatattgccttaaacgaacgccttaac
gaacttgaatttttctttagcgtgccagaacgatttaatccgacgcaatttaatcagatc
ttggcagaacatcatcacttaccaagtgaaccgcttattttagaaagttttaaaggcatg
atgcacggttttattgacttagtctttgtgcatgaagggaaatattatctcgtggattat
aaatccaatatgctcggcacctcgcaaaatgcctataaccaaaccaatatccgtcagaaa
atgttaaacgaacattatgactggcaatacttaatctacgttgtggcactgaatcgatat
ttgcgtagtcgcttacctgattatgactacgagcgtgattttggcggtgtgatttatcct
ttcctaagaggcatgacggggcaagcgggcgagggcatttattttgataaacctaccaaa
acgttggtggatacattggaggcactgtttgcatgctaa
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