Apis dorsata (giant honeybee): 102672858
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Entry
102672858 CDS
T09121
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr04512
ECM-receptor interaction
adr04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102672858
04518 Integrin signaling
102672858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
adr00536
]
102672858
Glycosaminoglycan binding proteins [BR:
adr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102672858
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
102672858
NCBI-ProteinID:
XP_006619687
LinkDB
All DBs
Position
Unknown
AA seq
1504 aa
AA seq
DB search
MGPKALQLAAAFVVVQLLLPQTSSVRTKLRKQRSKSLQAQKPANSDYVYDYYDSYDDYDE
RNETITTTTPLPSSVTSNTASRSGLPTETLQTFYRSALSTDSPAQTTIRSFIQEVRDDLR
TTPERNPLPTEIVPGESNMINAVAVPGPRGEPGRPGDIGRPGDTGFPGQPGTPGIPGPPG
PPGPIPDVSMYYQQLALSQASQDKGPTGAAAPLYSPDAYLQTQVGPIGPRGPPGPPGPSG
PQGFQGVRGEPGEPGTPGPPGAPGPRGLPGLTGKDGNTGEDGEPGPPGSVGPVGPRGLPG
LPGLPGMKGHRGFPGLDGAKGEQGISGEKGSMGAPGPMGPVGPIGPAGPRGERGREGPPG
PPGIRGVDGISGPPGQPGAVGKPGSPGFPGNPGIKGDQGAQGPKGSQGIQGPRGETGRPG
QPGESGPQGPQGKDGISGEKGSTGASGLVGAPGFPGARGQPGIPGNPGIPGAKGMPGFPG
ERGFKGDSGVKGDSGIPGPRGLPGPPGNEGKRGKRGMRGPIGTPGPTGERGAPGAPGLPG
PDGPMGSKGQSGDRGPIGPIGPKGAIGDPGRPGSPGLQGTRGLMGRPGAPGKPGNPGERG
IQGADGKPGEQGPPGLQGLPGPLGLPGEKGYPGEPGKAGEPGNPGPSGPRGDTGKEGAPG
PQGSPGPSGADGERGPPGSPGPRGFQGFPGATGNAGTPGKDGEPGVQGPPGSPGIPGNRG
ERGFPGERGAAGGPGLMGPRGEPGVQGLDGPPGLPGVKGDKGISGPSGLVGLPGLRGAPG
ESGPKGERGPTGPIGLEGPPGRIGERGPQGQIGPPGPPGEPAERGDPGLPGPPGEIGAPG
NLGERGPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGDQGNPGPPGNPGETGPQGSIG
LTGSKGIRGEPGARGEAGIIGPPGVPGNIGAPGPPGAIGPLGPSGLPGSKGNTGEAGRPG
NPGPIGNPGLPGTDGNKGESGSQGPPGIPGPQGPQGSPGERGLPGLPGPSGPIGARGIRG
APGESGVPGKPGPEGPPGLLGQIGPIGPPGPPGEIGAEGSSGKPGPPGIAGRPGDKGPPG
AVGQTGLPGSPGLPGPPGQAGPPGSPGERGSKGETGPQGVEGQQGLRGKPGPIGLQGPKG
ERGEEGQKGLKGHRGFTGLQGLPGPTGPPGEKGIPGLPGLPGKDGEPGPRGSPGRDGNPG
PIGLIGNPGPKGPPGDEGRHGPPGSPGPPGPPGPPGELGLGYDAASLAALLGQGQIKGPD
PLIGDEPPRMFSQDMTEQERQELIQKAYKQLKSSFQKFIKPDGEKNSPAKTCRDLYSAYP
NKLSGEYWIDPNEGDARDAILVYCDAKKRATCLLPNPVHSPEIIHITDQPETWLSEIENG
MKITYKADSNQIGFLQLLSKNAYQNITYHCKNSIGYFDSERKTYRKGMKFLTWNDAELTP
RGNQRLRYEMIIDECRIHNGKWGKTIISYQTDKTIRLPIIDVALRDIGKPNQSFYIEIGN
VCYE
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggggccgaaggcccttcagctggccgcagcgttcgtcgtggttcagcttcttctgccc
caaactagctctgtacggactaaacttaggaaacaacggtcgaagtcactgcaagctcaa
aaacctgcgaacagtgattatgtatacgattactatgatagttatgacgactacgatgaa
agaaatgaaactataactacaactactccactaccatcatctgttacgtctaataccgca
agcaggagtggattaccgacagaaacattacaaaccttttatagatcagcattgtctaca
gattcaccagcacaaacaacaattcgatcttttattcaagaagttcgagatgatctgcgt
acaactccagaaagaaatccattaccaactgaaattgtacctggtgaaagtaatatgatt
aatgctgttgctgtacctggaccaagaggagagcctggtagacctggagacattggtcgt
ccgggagatactggatttccaggacaacctggcactccgggaattccaggaccacctgga
ccgccaggacctatacctgatgtatcaatgtattatcaacaattagctttatctcaagca
agtcaagataaaggaccgacgggagcagcagcacctttatatagtccagatgcttattta
caaacacaagtaggtcctattggtccccgtggtccaccaggtccacctggaccatctgga
ccacaaggctttcaaggagtacgaggagaacctggcgagcctggaactccaggtcctcca
ggtgccccaggtccaagaggattacctggtctaactggaaaagatggtaataccggtgaa
gatggagaacctggtcctccaggatcagttggtccagtcggtccaagaggtcttccagga
ctacctggtcttcctggtatgaaaggacatcgcggttttccaggattagatggtgcgaaa
ggagaacaaggtatatctggtgaaaaaggatctatgggtgcgcctggaccaatgggtcct
gtaggtcctattggtcctgcaggtccacgtggtgaaagaggtagagaaggtcctccagga
cctccaggaattagaggagtagatggaatttctggtccacctggacaacctggtgcagta
ggtaaaccaggttctcctggttttccgggtaatccaggtataaaaggagatcaaggagca
caaggaccaaaaggaagtcaaggcatacaaggccctcgaggtgaaactggtcgtcctggt
caacctggtgaatcaggaccacaaggacctcaaggaaaagatggaatatctggagaaaaa
ggaagtacaggagcatctggtttagttggtgctccaggttttcctggagctcgaggacaa
cctggaatacctggcaatcctggtattccaggagcaaaaggcatgcctggatttcctggt
gaaagaggatttaaaggtgacagtggagttaagggtgattcaggaattccaggtccgcgt
ggattacctggacctcctggaaatgaaggaaaacgaggaaaaagaggaatgcgcggacct
atcggtacgcccggtccaactggagaacgtggagcaccaggagcaccaggtcttccaggt
cctgatggaccaatgggatcaaaaggtcaatctggagatcgtggacccattggtccaata
ggaccaaaaggagctataggagatcccggtcgcccaggatcacctggattacagggtaca
cgtggattaatgggtcgtcctggtgcacctggaaagccaggtaatccaggagaacgagga
atccaaggagctgatggaaaacctggagaacaaggtccacctggcttacaaggtctgcct
ggcccactaggtcttccaggagaaaaaggatatccaggcgagcctggaaaagctggtgaa
cctggaaatcctggaccatctggtcccagaggtgatacaggaaaagaaggagcaccagga
ccacaaggttcacctggaccatcaggagcagatggtgaacgaggacctccaggatctcca
ggtcctagaggttttcagggttttccaggtgcaactggaaatgcgggaacgccaggaaaa
gatggagaaccaggtgttcaaggaccacctggttcaccaggtatacctggaaatagaggt
gaacgcggctttcctggagaaagaggtgctgcaggagggccaggattaatgggaccaaga
ggagaacctggagtacaaggattagatggtcctcctggattacctggagttaaaggagat
aaaggaatttcaggaccatccggattagtaggattgcctggtttacgaggagctccagga
gaatctggtccaaaaggagaaaggggacctactggaccaataggtcttgaaggacctcca
ggacggattggagaacgtggacctcaaggtcaaattggtccaccgggaccaccaggtgaa
ccagcagaacgaggtgatcctggtttacctggtcctccaggagagataggtgctcctggc
aatctaggagagagaggacctcaaggacttcaaggattacaaggtttcccaggacctcaa
ggacttattggtttaccaggattaaaaggcgatcgtggttatccaggtttaaagggagat
caaggaaatcctggtccacctggtaatccaggtgaaactggaccacagggttcaattggt
ttgactggatctaaaggaatacgaggtgaaccaggtgctagaggagaagctggtattata
ggaccaccaggagtaccgggaaacattggtgcaccaggtccaccaggtgcaataggacca
ctaggaccatctggattgccaggtagtaaaggtaatactggagaagcaggacgacctgga
aatcctggaccaattggaaatccaggtttacctggtacagatggaaacaaaggtgaaagt
ggttctcaaggtcctccaggtattcctggtcctcaaggtcctcaaggttctcctggtgag
agaggattacctggtttaccaggtccttctggaccaataggtgctagaggaatacgagga
gcacctggtgaatctggtgtacctggaaaaccaggaccagaaggtccacctggactttta
gggcaaattggaccaattggaccacctggaccaccaggagaaattggggcagaaggatct
agtggtaaacctggaccacctggaatagcaggtcgtcctggagataaaggaccacctgga
gcagtaggtcaaacgggattaccaggttctccaggtttacctggacctcctggtcaagca
ggtcctccaggatcaccaggagaaagaggatcaaaaggagaaacaggaccacaaggtgta
gagggacaacaaggacttagaggaaaaccaggacctattggactacaaggccctaaaggt
gaacgtggcgaagaaggacaaaaaggtttaaaaggtcatagaggatttactggtttacaa
ggcctacctggacctactggtccaccaggagaaaaaggaatacctggacttcctggacta
cctggtaaagatggtgaacctggacctagagggagtccaggacgagatggtaatcctgga
ccaattggattaattggcaatccaggaccaaaaggtcctccaggagatgaaggtcgtcat
ggaccaccaggttcacctggtccaccaggtcctccaggtccacctggtgaacttggatta
ggatatgatgctgcttctttagctgctcttctaggacaaggccaaattaaaggaccagat
ccattaattggtgatgaaccacctagaatgtttagtcaagacatgacagaacaagaaagg
caagaactaattcaaaaagcatataaacaactaaaatcatcatttcaaaaatttataaaa
ccagatggtgaaaaaaattcaccagccaaaacttgtagagatctttatagtgcttatcct
aataaactttctggagaatattggattgatcccaatgaaggtgatgcaagagatgcaatt
ttagtgtattgtgatgccaaaaaacgtgcaacatgtttattaccaaatccagtacattca
ccagaaattatacatatcactgatcaaccggaaacttggttaagtgaaatagagaatgga
atgaagattacatataaagcagatagtaatcaaattggttttctgcaacttctatcaaaa
aatgcatatcaaaatataacatatcattgtaaaaatagtataggctattttgattctgaa
agaaaaacatatagaaagggtatgaaatttttaacttggaatgatgctgaattaacacca
cgtggaaatcaacgcttaagatatgaaatgataattgatgaatgtagaatacataatgga
aaatggggcaagacaataatttcatatcaaactgataaaactattagattgcctattata
gatgtggccttacgagatattggaaaacctaatcaaagcttttatattgaaattggaaat
gtttgttatgaataa
DBGET
integrated database retrieval system