Apis dorsata (giant honeybee): 102674301
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Entry
102674301 CDS
T09121
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102674301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adr03041
]
102674301
Enzymes [BR:
adr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102674301
Spliceosome [BR:
adr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
102674301
Complex B
102674301
Complex C
U2 SnRNP specific factors
102674301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
MscL
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
102674301
NCBI-ProteinID:
XP_006616469
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MSYHRGGGNKPKGFGFAGFQMTGTKRSGSNVPPPPPNSALSKQGYHTMNSITENALSACW
GMPKKRSKTEEEYFEDDDDPPPYSLEYIPAPGSPTYDWMKKSTPKEDSDSEEDPLDAFMA
GIDAEVKKNNYEAQLAEDERKEEKSKGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQ
EIEYDEDGNPIAIPKKKEIDPLPPIDHSEIQYESFEKNFYNVHDEIANLNKQQVDDLRKT
LGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAALSGRDIIGIAK
TGSGKTAAFIWPMLVHIMDQRELKEGDGPIGLILAPTRELSQQIYQEARKFGKVYNVQVC
CCYGGGSKWEQSKALEGGAEIVVATPGRIIDLVKMKATNLTRVTFLVLDEADRMFDMGFE
PQVRSICNHVRPDRQTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVF
NNNPTGKWTWLLQNLIEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIER
NKVITAFKKKEVSTLVATDVAARGLDIPHIRTVLNYDVARDIDTHTHRIGRTGRAGEKGT
AYTLVTEKDKEFTGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAG
LGFRGRPEASSTSSCSSSSQGSKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRAS
SDHTWEQTITRPSVIMPPPPPVPPKPNTEQSKTQDTQASGGERKRVRKSRWE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaccgtggagggggtaataagccaaaaggctttgggtttgccggctttcaa
atgactggcacaaagagaagtggttctaatgtaccaccacctccaccaaattctgctcta
agcaaacaaggctatcatactatgaattccatcactgaaaatgctttatctgcatgttgg
ggaatgccaaagaaacgtagcaaaaccgaggaagaatattttgaggatgacgatgatcct
ccaccatactccttggaatatattccggcgcctggatctcccacttatgattggatgaaa
aaatcaacaccaaaggaagatagcgatagtgaagaagatcctctagatgcatttatggct
ggtatagatgcggaagttaaaaaaaataattacgaagctcaactggctgaagatgaacga
aaagaagagaaatctaagggattcagagcggatattgatggtgaggacgatgaagagagt
tattacaggtatatggaagaaaatccaactgcgggtttgcaacaagaggaatctgatcaa
gaaatcgaatacgacgaagatgggaatccaatcgcgattccaaaaaaaaaggagatagat
cctttaccacctatcgatcatagcgaaatacaatatgaatctttcgagaaaaacttttat
aacgttcatgatgaaattgctaatttaaataagcaacaggttgacgatttaagaaaaact
ttagggataaaagtatctggtccatctccgccaaatccggtcaccagtttcggtcatttt
ggttttgatgatgcattgataaaagctattagaaaaaacgaatatactcaacctactcct
atccaagctcaagcagttcctgccgcattgagcggcagagatataataggtatagcaaaa
actggtagtggcaaaacagcagcttttatttggccaatgttggttcatattatggatcaa
agagaattaaaggaaggtgacggacctatcggtttgattcttgctcctacaagagaattg
tcacaacagatttaccaagaagcaagaaaatttggaaaagtgtataatgttcaagtatgc
tgttgctacggtggaggtagcaaatgggagcaaagtaaagcattggaaggaggtgcagag
atagtagtcgcaacaccgggtagaataatagatttagttaaaatgaaggctacaaatttg
accagagtaacatttttggtattggatgaagctgatagaatgttcgatatgggttttgag
ccgcaagtacgttctatatgtaaccatgtaaggccagacaggcaaacgttgttgttcagt
gcaactttcaaaaagagggtagaaaagcttgctagggacgttttaacggatccagttagg
atagtccaaggggacgtcggtgaagcgaatgccgacgtcacacaacacgtgatagtgttc
aataataatccaaccggtaaatggacatggttattgcaaaatctgattgaatttttaagc
gctggtagtttattaattttcgtaactaaaaagctcaatgctgaagaacttgcaaataat
cttaaattaaaagaatttgatgttttacttttgcacggtgatatggatcaaattgaaaga
aacaaagtaataacggcttttaaaaaaaaagaagtcagtacattagttgctactgatgtt
gccgctcgaggtttggacattccacatatcagaaccgttcttaattacgatgtcgctaga
gatatcgatactcatacacatagaataggtagaacaggtagagcaggtgaaaaaggaaca
gcatatactcttgtaacagaaaaagacaaagaatttactggtcatttagtccgaaatttg
gagggtgcgaatcaagaagtaccaaagagccttatggatttagcaatgcaaagtgcttgg
tttcgcaagtcaagatttaaaggtggaaaaggaaagagtttgaatgttggaggagctgga
cttggatttaggggaagacccgaagcttcttctacatcgagttgcagttcctcatcacaa
ggatcaaaggatataagtgaagttgttaaaaaattagaaagacacgggccaggtagtgat
cggttatcagccatgaaagctgcattccgtagtcaatacaattctcaattccgagcatca
tcagatcatacgtgggaacaaactattacgcgaccttcagtgataatgcccccaccacct
cctgtacctccaaagccaaatacggaacaatcaaaaactcaggatacacaagcttccgga
ggagaaaggaagagagtgagaaaaagtcgatgggaatga
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