Apis dorsata (giant honeybee): 102674600
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Entry
102674600 CDS
T09121
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr03020
RNA polymerase
adr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102674600
09124 Replication and repair
03420 Nucleotide excision repair
102674600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adr03021
]
102674600
03400 DNA repair and recombination proteins [BR:
adr03400
]
102674600
Enzymes [BR:
adr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102674600
Transcription machinery [BR:
adr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
102674600
DNA repair and recombination proteins [BR:
adr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
102674600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
102674600
NCBI-ProteinID:
XP_006610903
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MATSDSKAPLRTVKRVQFGILSPDEIRRMSVTDGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVSPHNPK
IKEIVMKTKGQPRKRLTFVYDLCKSKNICEGGDEMDINKENQEQQSIERKPGHGGCGRYQ
PNLRRSGLDVTAEWTHVNEDSQEKKMALTAERAWEILKHITDEESFILGMDPKFARPDWM
VVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKANNELIRNEQAGAAAHVISENIK
MLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVIT
PDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNGERID
LRFHPKPSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSC
TSPYNADFDGDEMNLHAPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRKM
TKRDVFIEKEQMMNILMFLPSWDGKMPQPCILKPKPLWTGKQIFSLIIPGNVNMIRTHST
HPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGRF
YGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEPT
PGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACV
GQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLI
DTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLPT
IKLSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLNKDRAVLRE
IFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMKVIQGVKDLLDKCIIVAGDDR
LSKQANENATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEMVG
ALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAA
RDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPNKIS
PWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDNK
FQDSEEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDAKKRIVITETGE
FKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVLQ
FYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHAE
VDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKVGIEIPMAVGAGVMGTAGMFFGSVAT
PSMSPQMTPWMGATPGYGASSMSPALGSGMTPGGACFSPSGASDASGLSPAYSAYSPQPG
SPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSPTYSPTSPNYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNYTP
ASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPASPT
YSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKYSP
TSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDD
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtccgattctaaagcgcctctgcgaactgtaaaaagagtccaatttggcatt
ctttctcccgatgaaatacgtcggatgtccgtcacagatggcggtattcgttttccagaa
actatggaaggtggtcgcccaaaacttggtggacttatggatccaagacaaggtgtcatt
gatagaaattctagatgtcaaacatgtgcgggtaatatgacagaatgtccaggacatttt
ggtcatatagatttggcaaagccagtttttcatgttggttttataacaaaaacaataaaa
atcttaagatgtgtatgtttttattgttcaaaacttcttgttagtccacataatccaaaa
attaaagaaattgttatgaaaactaaaggtcaaccacgaaaacgtcttacatttgtttat
gatttatgtaaaagtaaaaacatttgtgagggtggtgatgaaatggatattaataaagaa
aatcaggaacaacaatctatagaaagaaaacctggacatggtggatgtggtagatatcaa
ccaaatcttcggagatctggtttagatgttactgctgaatggacacatgtaaatgaagat
tcacaagaaaaaaaaatggcacttacagcagaaagagcttgggagattttaaagcatatt
acagatgaagaatcatttattcttggtatggatccgaaatttgcacgaccagattggatg
gtagtaactgttttacctgttccacctttatcagttagaccagcagttattatgtatggt
tctgctaaaaatcaagatgatttaacacacaaacttgctgatattataaaagcaaataat
gaattaattagaaatgaacaagctggcgcagcagctcatgtgatatcagaaaatataaaa
atgttacaatttcatgtagcaacattagttgataacgatatgcctggtatgccaagagct
atgcaaaaatcaggtaaacctctaaaagctataaaagcaagattaaaaggaaaggaaggc
agaatacgaggaaatttgatgggtaaacgtgttgatttctctgctcgtactgttattact
cctgatcctaatttacggattgatcaagtgggcgtacctagaagcattgctcaaaattta
acatttcctgaaattgtaacgccttttaatattgacaaaatgcaagaacttgttagacgt
ggaaattcgcaatatccaggagctaaatacattgttcgagataatggagaaagaattgat
ttgagatttcatccaaaaccatccgatcttcatttgcaatgtggttatagagtggaacgt
catatccgagatggcgatttagtaattttcaatcgacaaccgacattacataaaatgagt
atgatgggtcatagggtgaaagtcttaccatggagtacatttcgtatgaatcttagttgt
acatcaccatataatgccgatttcgatggtgatgaaatgaatttacatgccccacaatca
atggagactcgtgcagaagtagaaaatattcatgtaacaccgcgtcaaattattacgcca
caagctaataaaccagttatgggtattgtacaagatacacttactgctgtaagaaaaatg
actaaaagagatgtttttattgaaaaagaacaaatgatgaatattcttatgtttttacct
agttgggatggcaaaatgcctcaaccttgcatactaaaaccaaaacctctatggactggt
aaacaaattttttccttgattataccaggcaatgtaaatatgataagaactcatagcaca
catccagatgaagaagatgatggaccatacaaatggatttctcctggtgataccaaagtc
atggtagaacatggagaacttgttatgggtatactttgtaaaaaaactttaggtacatct
gctgggtcattacttcacatttgtatgttagaattgggacacgaagtctgtggacgattt
tatggaaatattcaaactgtaattaacaattggttacttttggaaggtcattcaattggt
attggagatactattgctgatccacagacttatttggaaatccagaaagccatcaagaaa
gccaaagaagatgtgatagaagttattcaaaaagcacacaatatggaattagaacctaca
ccaggtaataccttaagacagacttttgaaaaccaagtaaacagaattctgaatgatgct
cgtgacaaaactggtggttctgccaaaaaatctctgacagaatacaataatttaaaggct
atggtagtatcaggatcaaaaggatctaatattaatatttctcaagttattgcttgtgtt
ggtcaacaaaatgtagaaggtaaacgtattccatttggttttcgtaaacgaacgttgcca
cattttattaaggatgattatggtcctgaatccagaggattcgtcgaaaattcgtatctt
gctggtttgactccatctgaattttattttcatgctatgggtggtcgtgaaggtcttatc
gatactgctgtaaaaactgcagaaactggttacattcaacgtcgtttaataaaagctatg
gaatctgtaatggtgcattatgatggaacagttagaaattctgtgggacaacttattcaa
ttacgttatggtgaagatggtttatgcggtgaaactgttgaatttcagaatctacctact
attaaattgagcaataaagcatttgagaaaaaattcaaatttgatccaactaatgaaaga
tatcttcgtcgtattttcaatgaagatatcgttagagaaatgatgggatctggtgaagta
atatctgaattagaaagagaatgggaacagttaaacaaagatcgtgctgtacttcgagaa
attttccctagcggagaatctaaagtagtattgccttgtaatttgcaaagaatgatttgg
aatgtacaaaagatttttcatataaataagcgtgcacctaccgatcttagtcctatgaaa
gtcatacaaggtgtgaaagatcttttggataaatgcattattgtagctggtgatgataga
cttagcaaacaagctaatgaaaatgctacattattattccaatgtttagtaagatctact
ttatgtacaaaatgtgtttctgaagaatttagattatccagtgaagcttttgaatggctt
attggagaaattgaaactagattccaacaagcacaggtatcacctggagaaatggtaggt
gctttagccgcacaatcacttggtgaacctgcaactcaaatgacacttaatacttttcac
tttgctggtgtatcatcaaaaaatgtaactcttggtgtgccaagattaaaagaaattata
aatatcagtaagaaaccaaaggctccatcgttgactgtatttttgacgggagctgcagca
agagatgctgaaaaagcaaaaaatgtactttgccgattagaacatactacattaagaaaa
gttacagcaaacactgcgatttattatgatccagatccacaaaataccgtaatcgcagaa
gatcaagaatttgtaaacgtttactatgaaatgcctgattttgatccaaataaaatatca
ccatggttacttcgaattgaattagatcgcaagaggatgaccgataagaaattaactatg
gaacaaattgcggaaaagatcaatgctggcttcggtgacgatttaaactgtatatttaat
gatgataatgccgaaaaattagttcttcgaattagaataatgaatagcgatgataacaaa
tttcaagatagcgaggaagaaactgttgataaaatggaggatgatatgtttcttcgatgt
attgaagcaaatatgcttagtgacatgacattacaaggcattgaagcaattggaaaagtg
tacatgcatttacctcaaactgatgctaagaaacgtatagttatcacagaaactggtgaa
tttaaagcaatagcagaatggttattagaaacggatggtacaagtttgatgaaagtattg
agtgaaagagatgttgatccagttagaacatttagcaatgatatttgtgagatatttcaa
gtattaggtatagaggctgtgagaaaatcagtagaaaaagaaatgaacgctgtgttgcaa
ttttacggtctttacgtaaactatcgtcaccttgctttgctttgtgacgtaatgactgct
aaaggacatttaatggctataactcgtcatggaattaatagacaagatactggtgctctt
atgagatgttccttcgaagaaacagtagatgttctattggatgctgcgtctcatgcagaa
gtagatccaatgagaggagtatcagaaaatattatcatgggacaacttccacgtatagga
acaggatgtttcgatttgctattggatgccgagaaatgtaaagtcggtattgaaatacca
atggcagtaggtgctggtgtgatgggaactgctggaatgttctttggtagtgttgctaca
ccaagtatgagtcctcaaatgacaccttggatgggtgccacacctggttatggggcttca
agtatgtcacctgcattgggaagtggtatgacaccaggaggagcatgtttctcgccatca
ggagcatcagatgcttcagggctttctcctgcatattctgcatattctccacaacctgga
agtccaggaagtccaggacctagcatgagtccatatccaatgtcaccagcaggtggcgct
tcaccaagttattcaccaacatctccagcctatttgccaacgtcgcctagtataacaccg
tcaagtccaaactattcacctacaagtcccacttattcacctactagtccaaactattca
ccaacaagtccaagttattcaccaacgagtccaagttattcaccaacatcaccaagttat
tcaccaacaagtccaagttactcaccaacatcaccaagttattcaccaacaagtccgagt
tattcaccaactagtccaagttattcaccaacaagcccaagttattcgccaacaagtcca
agctactcgccaacaagtccaagttattctcctacaagtccaagttattcaccaacatcg
ccaagttattctccaacaagtccatcatattcaccaacgtcaccgagctattcaccaaca
agtccaagttactcaccaactagtccaagttattcaccaagttcaccaaattacacacct
gcttcaccatcttattctccaacgagtccaagttattcaccaagttctccacaatattcg
ccagctagtccaagttattcaccgagtagtccaaaatattctccaacgagtccatcgtat
tcacctacgtctccatcatttgctggaacttcgccacaatatacaccggcgagtccaaca
tattctccaacaagtccaacatattcaccaacgagtccatcatattcacctagttcacca
caacacacagcatcaggaagtacaagatattcacctagtagtccaaattattccccaact
agtccaacatattcgcctacaagtcctcaatattcaccgtcgagtaccaaatattcacct
accagtccaacgtatacaccgactagtccaagttattcgccgacgagtccaacgtattct
ccaccagtaccgggttattctccaacgagtcccacgtattcccctgcatctccagcttac
gaaacagatgattaa
DBGET
integrated database retrieval system
