Apis dorsata (giant honeybee): 102676944
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Entry
102676944 CDS
T09121
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102676944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adr03019
]
102676944
03041 Spliceosome [BR:
adr03041
]
102676944
Messenger RNA biogenesis [BR:
adr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102676944
Spliceosome [BR:
adr03041
]
Complex B
Other components
Prp19-related factors
102676944
Complex C
102676944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_8
TPR_15
TPR_12
ARM_TT21_C
DHR-2_Lobe_A
PPR
ARM_TT21
TPR_10
4HB_MCP_1
Microp_apicomplexa_6
Motif
Other DBs
NCBI-GeneID:
102676944
NCBI-ProteinID:
XP_006608420
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MLERKDPEGNIYVFNEEDLPYEEEILRNPYSVKHWQRYIDHLKSTKSNNLNIVYERALKE
LPGSYKLWYNYLRQRVNQLKGRCITDLLYEDVNNAFERALVFMHKMPRIWMDYCTLMTEQ
CYITRTRQVFDRALRALPITQHHRIWPLYIEFLKKHNVYETAVRVFRRYLKLAPEDTEEY
IEYLRSIGRLDEAAIKLAQIVNQDDFISKHGKSNHQLWNELCDLISKNPSKIKSLNVDAI
IRGGLRRYTDQLGPLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE
ELSLSKRMEEVAKNPTEDDDIDLELRLARFEHLMERRLLLLNSVLLRQNPHNVQEWHKRV
RLYEGQPHEIINTYTEAVQTVQPQLAVGKLHTLWVEFGKFYEENNQIADARVVFEKATHV
PYTKVDDLASVWCEWAEMEIRHGNYKEALKLMHRATAMPFRKVAYHDETETVQMRLYKSL
KVWSMYADLEESFGTFKTCKAVYDKIIDLKIATPQIIINYGLFLEENKYFEEAFRAYEKG
IALFKWPNVYDIWNTYLTKFLKRYGGTKLERTRDLFEQCLEFCPPKYAKALYLLYAKLEE
EHGLARHAMSVYERATNAVLPEERFEMFNIYIKKAADIYGVPKTRQIYEKAIEVLNEDNT
REMCLRFAEMETKLGEVDRARAIYAHCSQICDPRVASNFWQIWKEFEVRHGNEDTMREML
RIKRSVQAMYNTQVNMMSAQMLNNTSNSLSDVPADAMRLLDSKTQDNITTYKDSIKFVRG
VTEKDGKPESQVNNPDEIDIDINDVNEGDIEEDIPIEKQTIPSQVFSSLKTTDDEDD
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacgaaaagatccagaaggaaatatatacgttttcaatgaggaagatttaccg
tacgaagaagaaattttaagaaatccatattctgtaaaacattggcaacgttatatagat
cacttaaaaagtacaaaaagcaataatttaaatattgtatatgaacgagcattgaaagaa
cttcctggaagttacaaattatggtataattatcttcgtcaacgtgtcaatcaattgaag
ggaagatgtataactgatcttctttatgaagatgtaaataatgcatttgaacgtgcttta
gttttcatgcataaaatgcctagaatttggatggattattgtacattaatgacagaacaa
tgttatattacacgtactcgtcaagtttttgatagagcacttagagctcttcctattaca
cagcatcatcgtatatggccattgtatattgaatttttgaaaaaacacaatgtatatgaa
actgcagtcagagtttttagacgatatctaaagttagctccagaagatacagaagaatat
atagaatacttgagatcaattggaaggcttgatgaagcagctataaaacttgcacaaatt
gttaatcaagatgattttatatcaaagcatggaaaatctaatcatcaattatggaatgaa
ttatgtgatttaatatcaaagaatccttctaaaataaaatctcttaatgtggatgctatt
attagaggtggattaagacgttatactgatcaattaggtcctttgtggaattctttagca
gattattatgttcgtagtggtttatttgaaagggcaagagatatttatgaagaagcaata
caaacagtaactactgtcagagattttactcaagtatttgatgcctatgcacaatttgaa
gaacttagtcttagtaaacgtatggaagaagttgcaaaaaatcctactgaagatgatgat
attgatttggaattgagattagcacgatttgaacatttaatggaaagacgtttattactt
ttgaattctgtattactcagacaaaatcctcataatgtacaagaatggcataaaagagtt
agactttatgaaggacaaccacatgaaatcattaatacatatacagaagctgtacaaact
gtgcaaccacaattagcagtaggtaaattacatactttatgggttgagtttggtaaattt
tatgaagaaaataatcaaatagcagatgctagagtagtttttgaaaaagcaactcatgtt
ccttatactaaagtagacgatctcgcttctgtatggtgtgaatgggcagaaatggaaatt
aggcatggaaattataaagaagcattaaaacttatgcatcgcgcgacagctatgccattt
cgcaaagtagcttatcatgatgagacagaaacagttcaaatgagattatacaaatcttta
aaagtttggtctatgtatgctgatttagaagaaagttttggaacatttaaaacatgcaaa
gctgtatatgacaaaattatagatctaaaaattgcaacaccacaaatcattattaattat
ggtctttttttggaagaaaataaatattttgaagaagctttcagagcttatgaaaaaggt
attgcactctttaaatggcctaatgtttatgatatatggaatacatatcttacaaaattt
ttaaagcgttatggtggaacaaaattagaacgaacgcgagatttatttgaacaatgttta
gaattttgtccaccaaaatatgctaaagctttatatttactgtatgcaaaattagaagaa
gaacatggtttagctagacatgcgatgtctgtatatgaacgagcaacaaatgctgttctt
cccgaagaaagatttgagatgttcaatatatatataaaaaaagcagcagatatatatggt
gtaccaaaaacaagacagatatatgaaaaagctattgaagtacttaatgaagataataca
agagaaatgtgtttaaggtttgcagaaatggaaacaaaattaggagaagttgatagagct
cgggcaatatatgcccactgcagtcaaatttgtgatccaagagtagcatcaaatttttgg
caaatatggaaagaatttgaagtaagacatggtaatgaagatactatgcgtgaaatgctt
cgaattaaacgtagtgtacaagctatgtacaatactcaagtaaatatgatgtctgcacaa
atgttgaataatacatcgaattcactatcggatgtaccagcagatgcaatgcgtcttttg
gatagtaaaacacaagataatattactacatataaggatagtattaaatttgttcgtggt
gtgacagaaaaagatggtaaaccggaatctcaagtaaataatccggatgaaatagatatt
gatattaatgatgttaatgaaggagatatagaagaagatatacctattgaaaaacaaact
attccgtcacaagtgttcagtagtttaaaaacaactgatgatgaagatgattaa
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integrated database retrieval system
