Apis dorsata (giant honeybee): 102677825
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Entry
102677825 CDS
T09121
Name
(RefSeq) collagen alpha-1(IX) chain-like isoform X1
KO
K06823
collagen type XVIII alpha
Organism
adr
Apis dorsata (giant honeybee)
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
adr04147
]
102677825
00535 Proteoglycans [BR:
adr00535
]
102677825
00536 Glycosaminoglycan binding proteins [BR:
adr00536
]
102677825
Exosome [BR:
adr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102677825
Proteoglycans [BR:
adr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102677825
Glycosaminoglycan binding proteins [BR:
adr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102677825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
102677825
NCBI-ProteinID:
XP_006625058
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MRSRLQSLIFALFCVTRVNADFFAEKKEINYDLLEAAVASVDTDDNNLYIDDGLDGFPSF
GFRPGSEVKQPYRLYLPEKLPAEFTLVATFKPMSFRTSYLFAVLNPFETVVQLGIRISDG
PGTNQNVSLVYTNSDLHSHSEEVAKFTVPKLSRKWSKIVIRVSTTDVTLYLNCHEMARQR
VTRIPLELVFDTASTLYIAQAGPHIQEKYDGLLQSLKLYPGHPADLVKCTADFNFDQDVD
LGSGEIDNEVIDNGSGFDINLTDIGRDDDEDRSEESNPPPFITPPPPNPDYKGPKGEKGD
KGDKGESVRGPPGPPGPPGQDEGPPGKKGEPGTCTCNATALMASFTMPKMIQGPKGEQGV
PGQEGKQGQMGLTGVAGPPGERGLEGPQGPKGDKGDVGIPGPEGPQGQKGEPGRDGIPGE
KGAQGPPGPPGKGEFSGYDPSWKPRSIYRTEGITMRPGLPGQKGEAGLPGSPGPKGETGI
AGAKGNKGEPGHKGAKGDHGNEGARGIQGSKGEPGAPGAPGLPGAPGENGRPAEKGDKGD
TGPEGKPGPPGAPGPPGLPGLSGPGGVNVGESMLREKGDKGEGGARGYKGDKGTKGEKGD
KGDSGPAGIPGVNGIQGPQGNKGEPGKDGVAGVQGIAGAKGEKGERGPAGITTIASSGDY
ITIKGEKGAEGKRGRRGRPGPPGPVGPPGKPGAMGEIGLPGWVNTMKGRPGTPGLPGPVG
PAGPKGEKGEPGTPSPYGVSVGVKGDKGDDGFPGIPGQPGREGQRGPPGPPGPPGPPSQG
NYIPVPGPPGPPGPPGPPGLSLIGQKGEPGIGRSHIFGERDYYGVRQVQSVKKKHVPYPT
LQGPRTSLDELKALRELKQLKELKEHLGAGTTATRGPLESTTKIVPGAVTFQNTEAMTKM
SAVSPVGTLAYIIDEQALLVRVNNGWQYIALGSLLPITTPAPPTTSPPPVNPPFEASNLI
NQIPVKADGTGWYPRMLRMAALNEPFTGDMHGVRGADYACYRQAKRAGLRGTFRAFLSSR
VQNVDSIVRLGDRDLPIVNIKGDVLFNSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFAW
PEKVAWHGSHKLGDRAMDTYCDAWHSSSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCI
EVTSETTRRRRNAEIVEDEDEMSENDYKEYLDSLMED
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctagattgcagtcgctgatattcgccttgttctgtgtgacgcgcgtcaacgcg
gactttttcgccgagaagaaagaaataaattatgatttactcgaggctgccgtggcgtct
gtcgatacggacgacaataatttgtacatcgacgatggtctcgatggatttccaagtttt
ggcttccgacccggatccgaagttaaacaaccctatcgattatacttgccggaaaaattg
ccagcagagttcacccttgtggcaactttcaaaccgatgtcctttaggaccagttatctc
ttcgcggttttgaaccctttcgagacagtggtgcaattagggattcgtatatcggatgga
ccaggcaccaatcaaaatgtctcattggtctacaccaattccgacttgcattcacattca
gaagaggtggcgaaattcacggtgccgaagttgtcgagaaaatggtctaaaatcgttatc
agagtatcaacaacggatgtcactttgtacctgaattgtcacgagatggccagacaacga
gtgacaagaattcctctggaattggtattcgacacagccagcacgttgtacatcgctcaa
gctggacctcatatccaagaaaagtatgacggtctactgcaatccttgaagctctatccc
ggacatccagcggatttggtaaaatgcacggccgactttaacttcgaccaagatgtggat
ctcggctcaggtgaaatcgataacgaggtgatcgataatggttcaggatttgatattaat
ttgacagacatcggacgagacgatgacgaagacagaagcgaggaaagcaatccaccgcca
ttcatcacaccccctcctcccaacccggactacaagggaccgaaaggtgagaaaggtgat
aaaggcgacaagggtgagagcgttagaggacctccaggtcctcctggtccacctggtcaa
gatgagggtccgccagggaagaaaggagaacccggcacgtgcacctgcaatgcaacagcc
ctgatggcatcctttacgatgccaaagatgatccagggaccgaaaggagaacaaggggtg
ccggggcaagaaggaaaacaaggccaaatggggctgacgggtgttgctgggccaccagga
gagagaggattagaagggccacaggggcccaagggagataaaggtgacgtgggaataccg
ggaccggaaggtcctcaaggtcaaaaaggagaacctggccgcgatggaataccaggagaa
aagggcgctcaaggacctccaggccctccaggaaagggagaattctccggatacgatccc
agttggaaaccccgaagcatttataggacggaaggaatcacgatgaggccaggactgcca
gggcagaaaggcgaagcaggccttccgggaagtccaggaccaaaaggagagacgggaatc
gctggtgccaaaggtaacaaaggcgagccaggtcataaaggcgcgaaaggggatcacggg
aatgagggtgctcgaggaattcaaggatcgaagggtgaacctggtgcaccgggagcgccg
ggtctccctggtgcaccaggtgagaatggaaggccagctgaaaagggtgataaaggagac
acagggccagaagggaagccaggccccccgggagcgcctggaccgccaggattgcctgga
ttaagcggtcctggaggagtaaacgttggagaatcgatgttaagggaaaaaggcgacaaa
ggagagggtggtgcgcgtggttacaaaggagacaagggcaccaaaggcgagaagggagat
aaaggtgattctggaccagcaggaattcccggtgtaaatggtattcaaggaccgcaaggg
aacaaaggcgagccaggcaaggatggagttgccggtgttcagggaatcgcgggtgcaaaa
ggtgaaaaaggtgagagaggtccggcaggaatcaccactatagcgagttccggagactac
atcacgatcaagggtgaaaagggcgcggaggggaagagggggagaagaggacgccctgga
ccaccgggacccgtcggcccacctggaaagccgggagcgatgggagaaattgggttgcct
ggatgggtgaataccatgaaaggtcgtcctggaactcccggacttcctggacctgttgga
ccagcggggcccaagggagaaaaaggagaaccgggcacaccgagcccttatggagtctct
gtcggtgtaaagggtgataaaggagacgatggttttcctggaattccaggacaaccagga
agggaaggtcaaagaggaccgccaggacctccaggaccacctggaccaccatctcaagga
aattatattccagtcccgggacctccaggacctcctggaccaccaggtccgcccggatta
tctttaatcggacaaaaaggagagccaggaatcggcagaagtcacatctttggtgaaaga
gattattatggagttagacaagttcaaagtgttaaaaaaaaacacgttccatatcctacg
ctgcaaggaccaagaactagtctagacgaattgaaagcactgcgggaattaaaacaattg
aaggaactaaaagaacatttaggtgctggaacaactgcaaccagaggtcctctcgaaagc
acaacgaagattgtaccaggagcagtaacttttcaaaataccgaagctatgacgaaaatg
tctgccgtgagcccagttggaacattagcttacattatagacgaacaagcactactcgtt
agagtgaataatggctggcaatacattgcattgggctcacttttaccaataactacacca
gcaccacctactacatcaccacccccggtaaatccaccttttgaggcttctaatctgatc
aatcaaatacccgtaaaagcagacggaacaggatggtatccacgaatgttacgaatggct
gctttgaacgaaccctttaccggggacatgcacggtgtacgaggagctgactacgcttgt
tatcgacaagcgaagcgagctggtttgaggggtacattccgcgcattcctcagttctaga
gttcaaaatgttgacagcatcgtgaggcttggagatcgagatttgcctatcgttaacata
aagggggacgttctcttcaattcgtggaaggaaatgttcaacggaaacggggcctatttt
tcacaaaacccaagaatctacagttttaatgggaaaaatatcctcactgattttgcatgg
ccagaaaaagtggcatggcacggatcacataaattaggagaccgagcaatggacacgtat
tgcgacgcttggcattcaagtagttcggatcgttatggattaggatcaccgttaacagga
ggacgtctcttggaacaagttcgttattcgtgcgacaacaagttcgcgctactctgtata
gaagtaaccagcgagaccacaaggagaaggagaaacgccgaaattgtggaggacgaggac
gagatgtcggaaaacgattacaaagaatacttggattctctcatggaagactaa
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integrated database retrieval system
