Apis dorsata (giant honeybee): 102678817
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Entry
102678817 CDS
T09121
Name
(RefSeq) uncharacterized protein LOC102678817 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102678817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
adr03021
]
102678817
03019 Messenger RNA biogenesis [BR:
adr03019
]
102678817
Transcription machinery [BR:
adr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102678817
Messenger RNA biogenesis [BR:
adr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102678817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
HEAT_MROH2B_C
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
102678817
NCBI-ProteinID:
XP_006622337
LinkDB
All DBs
Position
Unknown
AA seq
1901 aa
AA seq
DB search
MTSTKSKEIADEYISSLSDLTINSKPLINMLTMLAEDNIEHAPAIVQAVENHLQKVRSEI
KLPVLYLIDSIVKNVNGAYLNLFTQNIVNTFCGVFEKVDENTRASMWKLRQTWNDVFPAK
KLFSLDVRVQSIDPAWPITASPTSVSSGSIHVNPRFFSMPQQSATSIVSQPIVAPVKLPP
GDPVTPTEAAMREQLLKKQRELIELQKKKIELELLQAKANLEQQQRQLDKQAGNLKAELV
TVTTHITSSTETITQGKLVATTVPSQAPKQVAKQFPAATASLLKNAGINNGPRIAPASSI
AVASAKPVSRDPRLKTTSVQDISVSSVDPRQRISTPTQKDSRGEAQSQLAANTNTVLSDQ
LKQQILSKQAVTSTINKSPTNLAGSDTATLNASNNNNANTNLNNNNNNKNFSGNANKDAV
SHRTSQKKDPRLSSNSSGNLNSNSSKGSQNLSVGSNSSLSVGNRGGGSNDSKSKDSKISN
SRSSSSSTIDKSSASSKSSHRKVGNKSRSKQPQTSPSKIPKVDRDASPVRSKSREKDSGD
SSPSSRTSPQSFQTCKNRKKNTKSRKRSPSPPYRIPRRNDAKSNSVLNNSGGVTEEEQSG
SLIVSPPHPPTFKEIRPNARQRNYVRRNKDGSLSPERSPVNAGNVQTTVEPTVESSSKDE
DLRATLPLPGAATSVLEKKEDLDLRVLPPPVNTNKRQTSEHMESALAKKTKAEKFDALFG
NEDVDLRTLTHPKAGRPPTPPPPVISGEDGKDSWAKLKTPSKNDREKQANNNDDKRDNRD
RNRDRLGRLRLYNKLPDDPKERRRTLSNEDQDNRSGRRGRENDKPEKNEDRNIEIIMKQA
AEQLNQGTITKTQYNTLIQEVLHMSEDRKLRAAQRKEKEVGSIVWEKGVNLDITGPSDRT
STFSPSADKEMIRNKDHPIARNPNGPRWQTQPWQQPGPWAHPPGPPYGGPQGHFNSDFRP
VGPWQNPRHFGPMRPDYQYHGGFNHTMGPNPRLGPGMMGPIGPNGPLMSNLLPNGPIGPM
GNPPMSLSGINGPGMIINNGPMTNLISNPNMSLNASRNVSPSSSSKYDLEDSDQNYTTTM
IKNPNPHSRELPPPDPKLLDEIARDTMKSIDIDIQHIPREIRYYGQTGVVFMNWDDPREI
GFQDGIRRVLIDDKITITCAFNDQYKEFIYEGEVHRIKLGAPTRELYIDDKWYECYFGGM
PVTVDLGGKKVSVKLEGPPPLVKIGTVKRTDLVVAKINLIINARNMVPVFLDAKPQIFEI
EGKPHTLEFIDSLQTVLLNGRPFKVEFGGLPKPIIVRDKKHFIRFSVLPRGVRPGYVKIA
GMKGEEPIEAPPTPPLLTQKPKVDTASTPTQFSAVEHESTSQDGSDLRSTPKPDLQLDML
SSALPSAMAPSSGLSYQAEPAENPPAAAPPLSLPLNMNELFQRLVETGIVSNLSEQKKQE
EEEKKEPEIIPVSFDKPETLKVKQPAIAAALYSGMQCSSCGARFAPELATRYSHHLDWHF
RQNRRERDSARKAHSRPWYYDVSDWIQFEEIEDLEDRVQSWFETEKQTADTEGITAEDSP
QEAAQPSVPTGTDEDSRCQVCHDAFEQFYNEEKEEWHLRPAINFEGKNYHPLCLDDYKEK
SLVRALEKSALALEETIEEMEDEKKESSDETFIEDNKTDELSVEALNTEFEIIEPSNDVI
EDNVSEEPAERDNKEEETIIEDNIDCIEQNEKIEEQELEYNNKEDLDIESIEKENIETEI
PETENVDKSFKNIKIKEEPIDEPEEQLEEEHFDFTNIEIKEEPIEPEPGXEESIITEPAT
VDTTYAAVKSSIDGNVELDSTPAAIPTAPSRIKINITKPLCINKEPEESKEKEKSIIETS
TEEIIEPLVPASIKPALQGRKLSNLPPVERGQELSGLCSIM
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaacaaaatctaaggaaatagcagatgagtacatctcatcattgtctgatttg
acgatcaacagtaaaccattgattaatatgcttactatgctggctgaagataatatagaa
catgcaccagctattgttcaagctgttgaaaatcatttgcaaaaggtgagaagcgagatc
aaattacctgttctttatttgattgattcaattgtgaagaatgttaatggagcatatttg
aatctcttcactcaaaatattgtaaacactttttgtggagtatttgaaaaggtggatgag
aatacacgagctagcatgtggaaattaaggcaaacctggaatgatgtatttccagcaaag
aaattattttctttagatgtacgagtgcaaagtattgatcctgcctggccaatcactgcc
tctcccactagtgtttcttcgggatctattcatgttaatcctcgttttttttcaatgcct
caacaatcagcaacatctattgtctcacaaccaattgtagcacctgttaagcttccacca
ggtgatccagtaacacctacagaagcagcaatgcgagaacaattattaaaaaaacaacga
gaactgatagaattgcaaaagaaaaaaattgaattagaattacttcaagctaaagctaat
ttagaacaacaacaacggcaacttgataaacaagctgggaatttaaaagctgaactggtg
acagttacaacgcatattacatcaagcacagaaactatcacacaagggaaacttgttgca
actactgtgccaagccaagcacccaaacaagtagctaaacagtttccagcagcaacagct
tcgcttctaaaaaatgcaggaataaataatggcccacgaattgcaccagctagtagtata
gcagtggcatcagctaaacctgtatctcgtgatccaagattaaagactacctcggttcaa
gatatatcagtttcaagtgtggatcctcgtcagcgaataagtacaccaactcaaaaggat
tcgcggggtgaagcccaatcgcagttagcagcaaatacaaacactgtactttcagatcaa
ttaaaacagcagatactttcgaaacaggctgtgactagcactatcaacaagtctccgaca
aatcttgccggctccgatactgcgacattaaacgctagtaataacaataatgctaatacg
aacctcaacaataataataataataaaaatttcagtggtaacgcaaataaagatgctgtg
tcgcatcgaacaagtcaaaagaaagaccctcgattgtctagtaatagtagtggtaaccta
aacagtaatagttccaaaggttctcaaaatctatctgtgggtagtaatagttctttatcc
gtgggtaatagaggaggtgggagtaacgattctaagtcgaaagattcaaagatttcgaat
tctcgaagttcttcatcgtcgacgatcgataaatcttccgcttcctcgaaatcctcgcat
agaaaagtaggtaataaatcgcgatctaaacaacctcaaacatctccgagtaaaatacca
aaagtcgacagagatgccagtcctgttagatccaaatctcgtgaaaaagacagtggagac
agttcaccatcttcgcgtacctctcctcaatcctttcaaacctgtaaaaatcgaaaaaag
aatacaaaatcgagaaagcgcagtccaagccctccatatagaattcccaggcgtaatgat
gcaaaatccaattcagttctaaataattctggtggtgttactgaggaggagcaatctggt
tcattgatagtctctcctcctcatccacctacatttaaagaaatcagaccaaatgctaga
caaagaaattacgtaaggcgtaataaggatggcagtcttagtcccgaacgctctccagta
aatgctggaaacgttcaaactactgtggaaccaactgtggaatcatccagcaaggatgaa
gatttgagagcaactctacctcttccaggtgcagccacttcggtattagaaaagaaagag
gacttagatttacgtgtattgccaccaccagttaataccaataaaagacaaacttcagaa
catatggaatctgctttagcaaagaaaacaaaagctgaaaaatttgatgcattatttgga
aatgaagatgttgatttacgaacattgactcatcctaaagctggacggccacctacacca
cctccacctgtaatatctggtgaagatggtaaagatagttgggcaaaattaaaaacaccg
tcaaagaatgatagagaaaaacaagctaataataatgatgataagcgggataacagagat
cgtaacagagataggttgggtagactcaggctttataacaaacttccagatgatcctaaa
gaaagaaggagaacattatcgaatgaagatcaagataatagatcaggtcgacggggtcga
gaaaatgataaacccgaaaaaaatgaggatagaaatattgaaataataatgaaacaagct
gctgaacaattgaatcaaggtactattactaaaactcaatataatactcttattcaagaa
gttttacatatgagtgaagatcgaaaattaagagctgcacaacgaaaagaaaaagaagtt
ggttctattgtatgggaaaaaggtgtaaatttagatataacaggtccatcagatcgtaca
tctacattcagtccttctgctgataaagaaatgattagaaataaagatcatcctattgca
agaaatccaaatggtcctagatggcaaactcaaccttggcaacaaccaggaccatgggct
catccacctggacctccatatggtggtccacaaggacattttaattcagattttagacca
gttggtccatggcagaatccaagacatttcggtccaatgcgaccagattatcaatatcat
ggtggctttaatcatactatgggtccaaatcctcgtttaggacctggaatgatgggacct
ataggaccgaatgggccgcttatgtcaaatttattacctaatggcccgatcggacctatg
ggtaatccacctatgtcattatctggaataaatggacctggaatgataataaataatgga
ccaatgacgaatcttatatcaaatccaaatatgtctttgaatgcttcaagaaatgtatca
ccaagttcatcctcaaaatatgatcttgaagatagtgatcaaaattataccacgacaatg
ataaagaatccaaatcctcatagtcgtgaattaccaccaccagatccaaaattattggat
gaaattgcaagagatactatgaaatctatagatatagatatacaacatataccacgtgaa
attagatattatggtcaaactggagttgtttttatgaattgggacgatccaagagaaatc
ggatttcaagacggtatacgacgagttttaatcgacgataaaatcactataacttgcgca
tttaatgatcaatacaaagaatttatttatgaaggtgaagttcatcgaattaagttgggt
gcgccgacgagagaattatatattgatgataaatggtatgaatgttatttcggtggtatg
cctgtaacagtagatcttggtggtaaaaaggttagtgtcaaattagaaggacctccaccc
cttgttaagattggtactgtaaagagaacagacttagtagttgccaaaattaatcttatt
attaatgctcgtaatatggttcctgtatttttagatgcaaaacctcaaatatttgaaatt
gaaggaaaacctcatacgcttgaatttatagattcattacaaacagttcttttaaatgga
cgaccatttaaagtagaatttggaggattgcctaagcctattatagtcagagataaaaaa
cattttataagattttcggtattacctagaggtgtccgaccaggatatgttaagattgca
ggtatgaaaggtgaagaacctattgaagcaccacctaccccacctttattgacacaaaaa
ccgaaagtggatacagcttctacaccaacgcaattttctgccgttgaacatgaatcaaca
tcgcaagatggttcagatcttagatctactcctaaaccggatttgcaattagatatgtta
tcttccgctttgccttctgcaatggcaccatcatctggattatcatatcaagctgaacca
gcagaaaatccacctgcagctgctccaccattatcattaccattgaatatgaatgaattg
ttccagagattagttgaaactggtattgtatcgaatctctctgaacaaaaaaaacaagaa
gaggaagaaaagaaagaaccagaaattattccagtttcatttgataaaccagaaacactt
aaagttaaacaaccagctattgcagcagcattgtatagtggtatgcaatgtagttcttgt
ggcgctagatttgcaccggaattggcaactcgatatagtcatcatttagattggcatttt
agacaaaatagacgagaaagagattctgcaaggaaagctcattcacgaccttggtattat
gatgtaagcgattggatacaatttgaagaaattgaagatttagaagatagagtacaaagt
tggtttgaaactgaaaaacagacagctgatacagaaggtattactgcagaagattctcct
caagaagctgcacaacctagtgttcctactggaactgatgaagattctagatgtcaagtg
tgtcatgatgcatttgaacaattttataatgaagaaaaggaagaatggcatttaagacca
gcaattaattttgaaggaaagaattatcatccattgtgtctcgatgattacaaggaaaag
agtctcgtgagagctttggaaaaatctgcattagcgcttgaagaaacaattgaagaaatg
gaagatgaaaaaaaggagagctctgatgaaacatttatagaggataataagactgatgaa
ttaagtgtggaagcattaaatactgaatttgaaataatagaaccgtcgaatgatgtaata
gaagataatgtatcagaagaacctgctgaaagagataataaagaggaagaaactataatt
gaagataatatagattgtattgaacaaaatgaaaaaatagaagaacaagaattagaatac
aataataaagaagaccttgatatagaaagtatagaaaaagaaaatattgaaacagaaata
cctgaaacggaaaatgtggataaatcttttaaaaatattaaaattaaagaagaaccaatt
gatgaacctgaggaacaattagaagaagaacattttgattttactaatatagaaattaaa
gaagaacctattgaaccagaaccaggtnncgaagaaagtataataactgaacctgcaaca
gttgacacaacatatgctgctgtaaagagctctatagacggaaatgtagaattagattct
acacctgcagcaattccgacagcgccatctcgaattaaaattaatattacgaaaccatta
tgtattaataaagaacctgaagaatcaaaggaaaaagaaaaatctataattgaaacatct
actgaagaaataatagaacctttggtgcctgcttctattaaacctgctttacaaggtaga
aaactttcaaatttacctcctgtggaaagagggcaagagttatcaggactctgctcaatt
atgtaa
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integrated database retrieval system
