Apis dorsata (giant honeybee): 102680404
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Entry
102680404 CDS
T09121
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102680404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
adr03041
]
102680404
Spliceosome [BR:
adr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102680404
Complex C
U5 SnRNP specific factors
102680404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
TPR_17
TPR_16
HAT_Syf1_CNRKL1_N
Suf
TPR_2
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_8
TPR_11
TPR_15
TPR_1
TPR_6
ARM_TT21_2nd
TPR_9
Iml2-TPR_39
TPR_CcmH_CycH
ANAPC3
ARM_TT21_N
FAT
NatA_aux_su
ARM_TT21
ARM_TT21_5th
TPR_MalT
ChAPs
TPR_21
ARM_TT21_C
TPR_Slam
T3SS_LEE_assoc
Motif
Other DBs
NCBI-GeneID:
102680404
NCBI-ProteinID:
XP_006621619
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MAVPSVSLSTRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPT
KRTKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRK
EYREKRLREELERYRQERPKIQQQFSDLKRELVNVSEEEWKNVPEVGDARNRKQRNPRAE
KFTPLPDSVLARNLGGETSTSIDPSSGLASMMPGVATPGMLTPTGDLDLRKIGQARNTLM
NVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPA
WIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPPDTAKAVIAQSVRHIPT
SVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECCP
TSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIDRAI
SSLSANGVEINREHWFKEAMEAEKAGAVHTCQVIVKAIIGFGVEEEDRKHTWMEDAETCA
QQGALECARAVYAYALSTFPSKKSIWLRAAYFEKTYGTRESLESLLQRAVAHCPKSEVLW
LMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARAS
APTPRVMMKSAKLEWALNNLDAALLLLKEALEAFDDFPKLWLMKGQIEEQQGNLDKALET
YNQAIKKCPNSIPLWRLLAQLEHRKGQVTKARSVLEKARLKNSKNPELWLEAIRNELKTG
GVRDMANTLMAKALQECPTSGLLWAEAIFMEPRPQRKTKSVDALKKCEHDPHVLLAVSKL
FWCEHKISKCRDWFNRTVKIDPDLGDAWAYFYKFELLNGTEEQQEDVKKRCIAAEPHHGE
NWCKVSKNIVNWCLSTDQILILVAKDLPIPI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcagttccatcagtttcattatcaacgagaaataaaaagcattttttaggtgttcca
gcacctttgggatatgtagcaggtgttggaagaggagctactggatttacaactagatct
gacattggtccagctcgagatgctaacgatgtttcagatgatagacatgctccacctaca
aaaagaacaaaaaaaaaggaagaagaagaagaagatgaagaagatttgaatgattctaat
tatgatgaattttctggatatggaggatcattgtttagtaaggatccatatgataaagat
gatgaagaagctgatgctatttatgaggcaattgataaacgaatggatgaaaagcgtaag
gagtacagagaaaaaagactcagagaagaattagaaaggtatcgtcaagaacgtcctaaa
attcaacaacagttttcagatttaaaaagagaattggtaaatgtaagcgaagaagaatgg
aaaaatgttccagaagttggtgatgctagaaatcgaaagcaacgaaatccacgagcagaa
aaatttacaccattaccagattctgttcttgcacgaaatttaggtggtgaaacgtccact
agtatagatccatcaagtggtttggcatctatgatgcctggtgtagcaacacctggaatg
ttaacacctactggagatttagatttaaggaaaattggacaagcaagaaatactttaatg
aatgttaaattgaatcaagtttctgattctgtagaaggacaaactgttgtggaccctaag
ggttatcttacagatttgcaaagtatgataccaacgtatggtggtgatatcaatgatatt
aaaaaagccagattattgctgaaatccgtaagagaaacgaatcctaatcatcctccagca
tggattgcttctgcacgtttagaagaagttacaggaaaagtgcaagctgcacgaaatttg
ataatgaaaggctgtgaagtaaatcctacatcagaagacttatggttagaagcagctaga
cttcaaccaccagatacagctaaagcagtaattgctcaatctgttcgacatataccaaca
tctgttagaatttggataaaagcagcagatttagaaaccgaaacaaaagcaaaaagaaga
gtatatcgtaaagcattagagcatatcccaaattcagtaagattatggaaagctgcagta
gaattagaagagccagaagatgcgcgaattttacttagtcgagcggtcgaatgttgtcca
actagtgtagatttatggcttgcgcttgctcgattagaaacctatgataatgccagaaaa
gtacttaataaagcaagagaaaatattccaactgatagacaaatttggacaactgctgct
aaattggaagaagcaaatgggaataaacatatggttgagaaaattattgatcgtgcaata
tcttctttaagcgcaaatggtgtggaaattaatagagaacattggtttaaagaagctatg
gaagctgaaaaggctggagcagtacatacatgtcaagtaatagttaaagcaattattggt
tttggagtagaagaagaggatagaaaacatacatggatggaagatgcagaaacttgtgct
caacaaggtgcattggaatgtgctagagcagtatatgcttatgcattatcgacatttcca
agtaaaaaatcaatttggttacgtgctgcttattttgaaaaaacgtatggaacacgagaa
tctttagaatctttgcttcaaagagcagttgctcattgtccaaagagtgaagtactttgg
cttatgggtgcaaaatcaaaatggttagccggagatgttccagcagcaagaggtatatta
tcacttgcatttcaagcaaatccaaattcggaggaaatttggttagcagctgtaaaacta
gaatcagaaaattctgaatatgaaagagctcgacgattgcttgcgaaagcacgagcatct
gcaccaactcctagagtgatgatgaaaagtgcaaaattagaatgggctctgaataatctt
gatgcagctttattacttctaaaggaagcattagaagcatttgatgattttccaaaatta
tggctaatgaaaggacaaatcgaagaacaacaaggaaacttggataaagctttagaaaca
tataatcaagctataaaaaaatgtccgaattctattccattgtggcgtttattagcacaa
ttagaacatagaaaaggtcaagttactaaagctagatcagttttggaaaaggctcgttta
aaaaattcgaagaatccagaactttggttagaagctatcagaaatgaattaaagactggt
ggtgttagagatatggcaaatacgcttatggcaaaagcacttcaagaatgcccaacatct
ggtttactttgggcagaagcaatttttatggaacctcgaccgcaaagaaaaacaaaaagt
gtagatgctttgaaaaaatgcgagcatgatcctcatgtgcttcttgcagtatctaaatta
ttttggtgtgaacataaaatttcgaaatgtcgagattggtttaatcgaacagttaaaata
gatccagatttaggagatgcttgggcatatttctataagtttgaacttttaaatggaaca
gaagaacaacaagaagatgtaaaaaagagatgtattgctgcagaacctcatcatggtgaa
aattggtgtaaagtttccaaaaatatagtaaattggtgtttaagtactgaccaaatttta
atattagttgcaaaagatttaccaattccaatataa
DBGET
integrated database retrieval system