Apis dorsata (giant honeybee): 102681256
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Entry
102681256 CDS
T09121
Name
(RefSeq) uncharacterized protein LOC102681256
KO
K03679
exosome complex component RRP4
Organism
adr
Apis dorsata (giant honeybee)
Pathway
adr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
adr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102681256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adr03019
]
102681256
Messenger RNA biogenesis [BR:
adr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102681256
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102681256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
Isochorismatase
KH_6
EF-hand_1
EF-hand_6
ECR1_N
EF-hand_5
EF-hand_7
EF-hand_8
EF-hand_4
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
102681256
NCBI-ProteinID:
XP_006621999
EnsemblRapid:
LOC102681256
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MEEYPPINIRLAVNRADLNLLKNKDIQPRIYTPGEEISSQSDFLRGHGTYVDDENTLRAS
VAGILEKVNKLISIKPLKARYQGEIGDVVVGRITEVQQKRWKVDTNSKLDSVLLLSSVNL
PGGELRRRSAEDEQTMRRYLQEGDLICAEVQSTFVDGSLSLHTRVLKYGKLSQGIMLKVS
PALIKRKKTHFHTLENGASLILGNNGYIWIGASRQDTDRSEGGFTQDLSRIPQVNRENLE
TTKLHQRNMDACFTAFDKDGDGYLSITEFEFICRALFRNDRGKVYNVEENQLKEIYSVFD
LNGDGKIDREEFEICWNRWIKICTRPKSAFLIVDVQNDFITGSLNIKQCAAQHDGSEVID
PINRLLETVQFDAVFYSLDWHPIDHVSFIDNLHLREIDPSSGTSKETAQVYDTITFRGPP
LLKQRLWPRHCIQDSWGAELHKDLKIIDNAIKIYKGTNSEVDSYSVFWDNKKMMETSLSS
QLQEKGATDIYICGLAYDVCVGATAVDALTSGYRTILIDDCSRGVDLVDIEKTKATVIAN
NGVIVNSSQVKAMVEGKDRRPELGYKLAIEIKQKLTFVDDDNQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatatccacctattaatattcgtttagcagtaaacagagccgatttaaattta
ttaaaaaataaagatatacaacctcgaatatatactcctggagaagaaatttctagtcaa
tctgatttcttaagaggacatggaacatatgtagatgacgaaaatacattacgtgcatct
gtagctggtattttagaaaaagtaaataagcttatttcgataaaacctttaaaagcacgt
tatcaaggtgaaattggagatgtagttgttggacgtataactgaagtacaacaaaaacga
tggaaagttgacacaaattctaaacttgactctgtattattactctccagtgttaattta
ccaggtggagaattgagaagaagatcagctgaagatgaacaaactatgagacgttatctt
caagaaggagatttaatttgtgcagaagtacaaagtacttttgtagatggttctctttca
ttacatactagagttttaaaatatggtaaattatctcaaggtataatgttaaaagtttca
ccagctcttataaaacggaaaaagacacattttcacactttagaaaatggtgcaagttta
atattaggaaataatggttatatatggattggagctagtagacaagatactgatagatca
gaaggtggtttcacacaggacttatcaagaattcctcaagtaaaccgtgaaaacttggaa
acaacaaagttacaccaaagaaacatggatgcatgttttactgcatttgataaagatgga
gatggatatttatctattacagaatttgaatttatttgtcgtgcattatttcgcaatgat
cgtggaaaagtatataatgttgaagaaaatcaattaaaagaaatatattcagtatttgac
ttgaatggagatggaaaaattgatagagaagaatttgaaatatgttggaatcgttggatt
aaaatatgcacccgtccaaagagtgcatttttaattgtggatgttcaaaacgactttata
acaggttctttaaatattaaacaatgtgctgcacaacatgatggttcagaagtaattgac
ccaattaatcgtttattagaaactgtacaatttgatgcagtattttattctcttgattgg
catcctatagatcatgtatcttttattgataatttacatctaagagaaattgatcccagt
agtggaacatcaaaagaaacagcacaagtttatgataccataacatttagaggtccacca
ttattaaaacaacgtttatggcctcgtcattgtattcaagattcttggggtgctgaactt
cacaaagatttgaaaattatagataatgcaattaaaatatataaaggaactaattcagaa
gtagattcatattcggtcttttgggataataaaaagatgatggaaacaagtttatcttcg
caattacaagaaaagggggcaactgatatatatatatgcggattagcctatgatgtttgt
gttggagctactgctgtagatgcacttacaagcggttatcggactattctcattgatgat
tgtagtcgaggagtagatcttgttgatattgaaaaaactaaagctactgttatagctaat
aatggagtaattgtaaattcaagtcaagtaaaagcaatggttgaaggaaaagatcgccga
ccagaacttggatataaattagctatagaaattaaacaaaaattaacttttgtagatgac
gataatcaataa
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